Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 AP000842.3-202ENST00000569238 1080 ntBASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 HIST3H2BA-201ENST00000436555 524 ntBASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 LINC01225-203ENST00000563550 1244 ntBASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 AL513190.1-201ENST00000621254 727 ntBASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 AC027369.3-201ENST00000530465 3707 ntBASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.98□□□□□ -0.33
LYSMD2Q8IV50 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms