Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 AC015922.1-201ENST00000421102 1152 ntBASIC13.75□□□□□ -0.21
TUBA1AQ71U36 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 AC190387.1-201ENST00000551683 408 ntBASIC13.75□□□□□ -0.21
TUBA1AQ71U36 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 LINC02084-201ENST00000606069 1096 ntBASIC13.75□□□□□ -0.21
TUBA1AQ71U36 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 AC084364.1-201ENST00000551967 1556 ntBASIC13.75□□□□□ -0.21
TUBA1AQ71U36 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 MEIS3P1-201ENST00000495167 958 ntBASIC13.74□□□□□ -0.21
TUBA1AQ71U36 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 AC092337.1-201ENST00000568699 1129 ntBASIC13.74□□□□□ -0.21
TUBA1AQ71U36 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 AC007614.4-201ENST00000564048 1827 ntBASIC13.74□□□□□ -0.21
TUBA1AQ71U36 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TUBA1AQ71U36 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms