Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAPH1Q70E73 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAPH1Q70E73 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAPH1Q70E73 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAPH1Q70E73 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAPH1Q70E73 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAPH1Q70E73 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAPH1Q70E73 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAPH1Q70E73 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAPH1Q70E73 AL139094.1-201ENST00000405549 1188 ntBASIC14.93□□□□□ -0.02
RAPH1Q70E73 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAPH1Q70E73 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 AC004790.1-201ENST00000612686 536 ntBASIC14.93□□□□□ -0.02
RAPH1Q70E73 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAPH1Q70E73 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAPH1Q70E73 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAPH1Q70E73 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.93□□□□□ -0.02
RAPH1Q70E73 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAPH1Q70E73 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAPH1Q70E73 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 C1QBPP1-201ENST00000400117 770 ntBASIC14.92□□□□□ -0.02
RAPH1Q70E73 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 GNAQP1-201ENST00000444815 1067 ntBASIC14.92□□□□□ -0.02
RAPH1Q70E73 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 RRP7BP-205ENST00000566851 833 ntBASIC14.92□□□□□ -0.02
RAPH1Q70E73 AC120045.2-201ENST00000567334 178 ntBASIC14.92□□□□□ -0.02
RAPH1Q70E73 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 SPDYE22P-201ENST00000582158 798 ntBASIC14.92□□□□□ -0.02
RAPH1Q70E73 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 BRI3BPP1-201ENST00000594224 787 ntBASIC14.92□□□□□ -0.02
RAPH1Q70E73 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.92□□□□□ -0.02
RAPH1Q70E73 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAPH1Q70E73 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAPH1Q70E73 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.91□□□□□ -0.02
RAPH1Q70E73 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAPH1Q70E73 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAPH1Q70E73 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAPH1Q70E73 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAPH1Q70E73 AL356585.2-201ENST00000625078 2396 ntBASIC14.91□□□□□ -0.02
RAPH1Q70E73 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAPH1Q70E73 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAPH1Q70E73 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms