Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 ACTG1P3-201ENST00000431775 1114 ntBASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 MIR5189-201ENST00000577370 114 ntBASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDKAL1Q5VV42 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CDKAL1Q5VV42 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDKAL1Q5VV42 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.08■□□□□ 0.17
CDKAL1Q5VV42 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDKAL1Q5VV42 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDKAL1Q5VV42 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDKAL1Q5VV42 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 AC140912.1-201ENST00000577171 1054 ntBASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 GNRHR2-203ENST00000581100 1187 ntBASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 LINC02560-201ENST00000596379 459 ntBASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CDKAL1Q5VV42 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 AC106760.1-201ENST00000508690 800 ntBASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 RN7SL204P-201ENST00000582831 262 ntBASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.07■□□□□ 0.16
CDKAL1Q5VV42 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms