Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18.18■□□□□ 0.5
RC3H1Q5TC82 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 DOC2GP-204ENST00000639052 2548 ntBASIC18.17■□□□□ 0.5
RC3H1Q5TC82 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 MIR1301-201ENST00000408518 82 ntBASIC18.17■□□□□ 0.5
RC3H1Q5TC82 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 AC026470.1-201ENST00000478038 846 ntBASIC18.17■□□□□ 0.5
RC3H1Q5TC82 AC008026.2-201ENST00000495438 348 ntBASIC18.17■□□□□ 0.5
RC3H1Q5TC82 RPS23-207ENST00000511844 530 ntTSL 2 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 MT2A-202ENST00000561491 581 ntTSL 2 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 AC104506.1-201ENST00000609247 429 ntBASIC18.17■□□□□ 0.5
RC3H1Q5TC82 AL359091.4-201ENST00000610052 409 ntBASIC18.17■□□□□ 0.5
RC3H1Q5TC82 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 CCT8L1P-201ENST00000465400 1674 ntBASIC18.17■□□□□ 0.5
RC3H1Q5TC82 AC019109.1-201ENST00000401725 1874 ntBASIC18.17■□□□□ 0.5
RC3H1Q5TC82 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RC3H1Q5TC82 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 AC063952.3-201ENST00000467756 308 ntBASIC18.16■□□□□ 0.5
RC3H1Q5TC82 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 TRMT112P3-201ENST00000580149 358 ntBASIC18.16■□□□□ 0.5
RC3H1Q5TC82 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RC3H1Q5TC82 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms