Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 BOLA2P3-201ENST00000404566 256 ntBASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 HOMER2P2-201ENST00000451621 847 ntBASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 RAB43P1-201ENST00000561790 589 ntBASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 AC104506.1-201ENST00000609247 429 ntBASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 PCDHA3-202ENST00000532566 4594 ntBASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 TMBIM7P-202ENST00000641474 1516 ntBASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.72□□□□□ -0.37
RSPO1Q2MKA7 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 MIR326-201ENST00000362220 95 ntBASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 AC119751.2-201ENST00000504529 210 ntBASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 AC079316.1-201ENST00000548397 411 ntBASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 DUX4L46-201ENST00000566845 751 ntBASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 KRT8P24-201ENST00000560290 1559 ntBASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO1Q2MKA7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 AL023775.1-201ENST00000454907 1746 ntBASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
RSPO1Q2MKA7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO1Q2MKA7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms