Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC084781.1-201ENST00000613737 656 ntBASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM1Q2M3G4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 RPSAP31-201ENST00000416648 895 ntBASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 RPS9P1-201ENST00000419943 583 ntBASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 AC103810.10-201ENST00000606504 343 ntBASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 AL354702.1-201ENST00000442006 1960 ntBASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 CICP14-201ENST00000629111 2732 ntBASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM1Q2M3G4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 AL807761.2-201ENST00000422849 729 ntBASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 AC092580.1-201ENST00000433998 658 ntBASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 MRPL22P1-201ENST00000505398 616 ntBASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms