Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 AP000346.4-201ENST00000614827 381 ntBASIC18.06■□□□□ 0.48
ATP2B3Q16720 AL136295.7-201ENST00000619226 1200 ntBASIC18.06■□□□□ 0.48
ATP2B3Q16720 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.06■□□□□ 0.48
ATP2B3Q16720 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2B3Q16720 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
ATP2B3Q16720 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2B3Q16720 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2B3Q16720 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2B3Q16720 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2B3Q16720 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2B3Q16720 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2B3Q16720 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2B3Q16720 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2B3Q16720 AC136759.1-202ENST00000530858 2194 ntBASIC18.06■□□□□ 0.48
ATP2B3Q16720 FAM90A7P-201ENST00000382628 1395 ntBASIC18.05■□□□□ 0.48
ATP2B3Q16720 FAM90A23P-201ENST00000400136 1395 ntBASIC18.05■□□□□ 0.48
ATP2B3Q16720 KRT8P28-201ENST00000433288 1390 ntBASIC18.05■□□□□ 0.48
ATP2B3Q16720 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2B3Q16720 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2B3Q16720 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2B3Q16720 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2B3Q16720 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2B3Q16720 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2B3Q16720 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.05■□□□□ 0.48
ATP2B3Q16720 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.05■□□□□ 0.48
ATP2B3Q16720 AC011742.3-201ENST00000439053 820 ntBASIC18.05■□□□□ 0.48
ATP2B3Q16720 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2B3Q16720 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 AC103988.2-201ENST00000561804 725 ntBASIC18.05■□□□□ 0.48
ATP2B3Q16720 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2B3Q16720 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2B3Q16720 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2B3Q16720 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2B3Q16720 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2B3Q16720 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2B3Q16720 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ATP2B3Q16720 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.04■□□□□ 0.48
ATP2B3Q16720 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.04■□□□□ 0.48
ATP2B3Q16720 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
ATP2B3Q16720 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.04■□□□□ 0.48
ATP2B3Q16720 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.04■□□□□ 0.48
ATP2B3Q16720 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 AC139712.1-201ENST00000378256 1875 ntBASIC18.04■□□□□ 0.48
ATP2B3Q16720 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 SLC25A24P2-201ENST00000415059 510 ntBASIC18.04■□□□□ 0.48
ATP2B3Q16720 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.04■□□□□ 0.48
ATP2B3Q16720 AL132994.2-201ENST00000603120 687 ntBASIC18.04■□□□□ 0.48
ATP2B3Q16720 AL021578.1-201ENST00000613646 709 ntBASIC18.04■□□□□ 0.48
ATP2B3Q16720 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.04■□□□□ 0.48
ATP2B3Q16720 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.04■□□□□ 0.48
ATP2B3Q16720 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
ATP2B3Q16720 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.04■□□□□ 0.48
ATP2B3Q16720 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.04■□□□□ 0.48
ATP2B3Q16720 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ATP2B3Q16720 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ATP2B3Q16720 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2B3Q16720 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B3Q16720 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B3Q16720 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B3Q16720 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B3Q16720 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B3Q16720 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B3Q16720 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B3Q16720 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B3Q16720 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms