Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.58□□□□□ -0.39
EFNB3Q15768 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
EFNB3Q15768 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
EFNB3Q15768 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.58□□□□□ -0.39
EFNB3Q15768 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.58□□□□□ -0.39
EFNB3Q15768 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 AL136172.1-201ENST00000598590 1394 ntBASIC12.58□□□□□ -0.4
EFNB3Q15768 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.58□□□□□ -0.4
EFNB3Q15768 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.58□□□□□ -0.4
EFNB3Q15768 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.58□□□□□ -0.4
EFNB3Q15768 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.58□□□□□ -0.4
EFNB3Q15768 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.58□□□□□ -0.4
EFNB3Q15768 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.58□□□□□ -0.4
EFNB3Q15768 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
EFNB3Q15768 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.58□□□□□ -0.4
EFNB3Q15768 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
EFNB3Q15768 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 SLC25A24P2-201ENST00000415059 510 ntBASIC12.58□□□□□ -0.4
EFNB3Q15768 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.58□□□□□ -0.4
EFNB3Q15768 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.58□□□□□ -0.4
EFNB3Q15768 AL157407.1-201ENST00000435784 904 ntBASIC12.58□□□□□ -0.4
EFNB3Q15768 VDAC1P1-201ENST00000439229 848 ntBASIC12.58□□□□□ -0.4
EFNB3Q15768 KLF2P1-201ENST00000447438 1042 ntBASIC12.58□□□□□ -0.4
EFNB3Q15768 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.58□□□□□ -0.4
EFNB3Q15768 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.58□□□□□ -0.4
EFNB3Q15768 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.58□□□□□ -0.4
EFNB3Q15768 HLA-J-204ENST00000495278 958 ntBASIC12.58□□□□□ -0.4
EFNB3Q15768 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.58□□□□□ -0.4
EFNB3Q15768 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.58□□□□□ -0.4
EFNB3Q15768 SNORD3B-2-202ENST00000571722 791 ntBASIC12.58□□□□□ -0.4
EFNB3Q15768 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.58□□□□□ -0.4
EFNB3Q15768 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 AL132994.2-201ENST00000603120 687 ntBASIC12.58□□□□□ -0.4
EFNB3Q15768 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 AC026740.1-201ENST00000607068 791 ntBASIC12.58□□□□□ -0.4
EFNB3Q15768 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
EFNB3Q15768 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.58□□□□□ -0.4
EFNB3Q15768 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.58□□□□□ -0.4
EFNB3Q15768 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.58□□□□□ -0.4
EFNB3Q15768 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
EFNB3Q15768 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.58□□□□□ -0.4
EFNB3Q15768 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
EFNB3Q15768 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
EFNB3Q15768 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
EFNB3Q15768 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB3Q15768 AC005089.1-201ENST00000619486 2241 ntBASIC12.57□□□□□ -0.4
EFNB3Q15768 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB3Q15768 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB3Q15768 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.57□□□□□ -0.4
EFNB3Q15768 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.57□□□□□ -0.4
EFNB3Q15768 AC125604.1-201ENST00000496255 707 ntBASIC12.57□□□□□ -0.4
EFNB3Q15768 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.57□□□□□ -0.4
EFNB3Q15768 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB3Q15768 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB3Q15768 MIR3619-201ENST00000579667 83 ntBASIC12.57□□□□□ -0.4
EFNB3Q15768 AC008805.1-201ENST00000590892 364 ntBASIC12.57□□□□□ -0.4
EFNB3Q15768 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
EFNB3Q15768 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 AC091544.8-201ENST00000619490 361 ntBASIC12.57□□□□□ -0.4
EFNB3Q15768 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 AL805961.1-203ENST00000641078 1258 ntBASIC12.57□□□□□ -0.4
EFNB3Q15768 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB3Q15768 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
EFNB3Q15768 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
EFNB3Q15768 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.57□□□□□ -0.4
EFNB3Q15768 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.57□□□□□ -0.4
EFNB3Q15768 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
EFNB3Q15768 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.57□□□□□ -0.4
EFNB3Q15768 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 AC013726.1-201ENST00000563747 2285 ntBASIC12.57□□□□□ -0.4
EFNB3Q15768 OR2I1P-209ENST00000641730 5365 ntBASIC12.57□□□□□ -0.4
EFNB3Q15768 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB3Q15768 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms