Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCS1Q01581 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGCS1Q01581 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCS1Q01581 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
HMGCS1Q01581 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCS1Q01581 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCS1Q01581 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
HMGCS1Q01581 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGCS1Q01581 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCS1Q01581 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCS1Q01581 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.27□□□□□ -0.12
HMGCS1Q01581 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.27□□□□□ -0.12
HMGCS1Q01581 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
HMGCS1Q01581 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCS1Q01581 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HMGCS1Q01581 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HMGCS1Q01581 AL035633.1-201ENST00000406139 838 ntBASIC14.27□□□□□ -0.13
HMGCS1Q01581 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGCS1Q01581 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HMGCS1Q01581 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGCS1Q01581 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.27□□□□□ -0.13
HMGCS1Q01581 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGCS1Q01581 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HMGCS1Q01581 AC027307.3-201ENST00000594262 1100 ntBASIC14.27□□□□□ -0.13
HMGCS1Q01581 AC145423.3-201ENST00000615987 467 ntBASIC14.27□□□□□ -0.13
HMGCS1Q01581 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HMGCS1Q01581 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGCS1Q01581 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGCS1Q01581 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGCS1Q01581 AC011474.4-201ENST00000623523 2076 ntBASIC14.27□□□□□ -0.13
HMGCS1Q01581 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
HMGCS1Q01581 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 AC215219.1-201ENST00000400706 1817 ntBASIC14.27□□□□□ -0.13
HMGCS1Q01581 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HMGCS1Q01581 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCS1Q01581 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
HMGCS1Q01581 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGCS1Q01581 AC011498.7-201ENST00000624986 2027 ntBASIC14.26□□□□□ -0.13
HMGCS1Q01581 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
HMGCS1Q01581 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HMGCS1Q01581 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HMGCS1Q01581 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HMGCS1Q01581 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.26□□□□□ -0.13
HMGCS1Q01581 AC245100.3-201ENST00000441281 285 ntBASIC14.26□□□□□ -0.13
HMGCS1Q01581 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
HMGCS1Q01581 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.26□□□□□ -0.13
HMGCS1Q01581 GCOM2-201ENST00000509133 1104 ntBASIC14.26□□□□□ -0.13
HMGCS1Q01581 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.26□□□□□ -0.13
HMGCS1Q01581 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGCS1Q01581 RPSAP52-203ENST00000622976 1023 ntBASIC14.26□□□□□ -0.13
HMGCS1Q01581 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGCS1Q01581 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HMGCS1Q01581 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HMGCS1Q01581 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HMGCS1Q01581 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCS1Q01581 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.25□□□□□ -0.13
HMGCS1Q01581 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms