Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 AC027612.1-201ENST00000445234 2395 ntBASIC12.44□□□□□ -0.42
HLA-DRB3P79483 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB3P79483 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB3P79483 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-DRB3P79483 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB3P79483 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB3P79483 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB3P79483 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB3P79483 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB3P79483 MST1P2-201ENST00000457982 2291 ntBASIC12.44□□□□□ -0.42
HLA-DRB3P79483 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB3P79483 AC099521.3-201ENST00000624251 2938 ntBASIC12.44□□□□□ -0.42
HLA-DRB3P79483 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB3P79483 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB3P79483 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.43□□□□□ -0.42
HLA-DRB3P79483 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 GIMAP3P-201ENST00000495150 836 ntBASIC12.43□□□□□ -0.42
HLA-DRB3P79483 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 AC093214.1-201ENST00000511688 1107 ntBASIC12.43□□□□□ -0.42
HLA-DRB3P79483 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 AC093726.1-201ENST00000608064 963 ntBASIC12.43□□□□□ -0.42
HLA-DRB3P79483 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 AC106028.4-201ENST00000614509 607 ntBASIC12.43□□□□□ -0.42
HLA-DRB3P79483 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 AC090505.1-201ENST00000430515 1834 ntBASIC12.43□□□□□ -0.42
HLA-DRB3P79483 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 AC016397.2-201ENST00000624848 1985 ntBASIC12.43□□□□□ -0.42
HLA-DRB3P79483 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DRB3P79483 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 AC003102.2-201ENST00000589195 1469 ntBASIC12.42□□□□□ -0.42
HLA-DRB3P79483 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB3P79483 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms