Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX6-1P78426 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 REXO1L4P-201ENST00000605109 1937 ntBASIC13.13□□□□□ -0.31
NKX6-1P78426 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX6-1P78426 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX6-1P78426 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 AL360270.3-201ENST00000609118 1348 ntBASIC13.13□□□□□ -0.31
NKX6-1P78426 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.13□□□□□ -0.31
NKX6-1P78426 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NKX6-1P78426 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NKX6-1P78426 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
NKX6-1P78426 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX6-1P78426 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.12□□□□□ -0.31
NKX6-1P78426 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.12□□□□□ -0.31
NKX6-1P78426 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NKX6-1P78426 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX6-1P78426 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.12□□□□□ -0.31
NKX6-1P78426 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX6-1P78426 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.12□□□□□ -0.31
NKX6-1P78426 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.12□□□□□ -0.31
NKX6-1P78426 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NKX6-1P78426 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.12□□□□□ -0.31
NKX6-1P78426 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX6-1P78426 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX6-1P78426 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.12□□□□□ -0.31
NKX6-1P78426 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.12□□□□□ -0.31
NKX6-1P78426 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX6-1P78426 RPSAP36-202ENST00000494591 1261 ntBASIC13.12□□□□□ -0.31
NKX6-1P78426 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.12□□□□□ -0.31
NKX6-1P78426 RNA5SP486-201ENST00000515961 83 ntBASIC13.12□□□□□ -0.31
NKX6-1P78426 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.12□□□□□ -0.31
NKX6-1P78426 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.12□□□□□ -0.31
NKX6-1P78426 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.12□□□□□ -0.31
NKX6-1P78426 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.12□□□□□ -0.31
NKX6-1P78426 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX6-1P78426 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.12□□□□□ -0.31
NKX6-1P78426 AL603764.1-201ENST00000636452 321 ntBASIC13.12□□□□□ -0.31
NKX6-1P78426 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.12□□□□□ -0.31
NKX6-1P78426 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NKX6-1P78426 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX6-1P78426 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NKX6-1P78426 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-1P78426 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NKX6-1P78426 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NKX6-1P78426 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX6-1P78426 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NKX6-1P78426 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NKX6-1P78426 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
NKX6-1P78426 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NKX6-1P78426 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX6-1P78426 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NKX6-1P78426 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX6-1P78426 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NKX6-1P78426 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms