Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
YBX1P67809 CD8B2-202ENST00000417670 633 ntBASIC14.39□□□□□ -0.11
YBX1P67809 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.39□□□□□ -0.11
YBX1P67809 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.39□□□□□ -0.11
YBX1P67809 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.39□□□□□ -0.11
YBX1P67809 COX5BP1-201ENST00000507622 393 ntBASIC14.39□□□□□ -0.11
YBX1P67809 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.39□□□□□ -0.11
YBX1P67809 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.39□□□□□ -0.11
YBX1P67809 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
YBX1P67809 C2orf69P2-201ENST00000562032 1123 ntBASIC14.39□□□□□ -0.11
YBX1P67809 AP006547.1-201ENST00000563435 692 ntBASIC14.39□□□□□ -0.11
YBX1P67809 AP005482.1-201ENST00000563722 1273 ntBASIC14.39□□□□□ -0.11
YBX1P67809 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
YBX1P67809 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.39□□□□□ -0.11
YBX1P67809 AL359881.2-201ENST00000602973 570 ntBASIC14.39□□□□□ -0.11
YBX1P67809 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.39□□□□□ -0.11
YBX1P67809 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.39□□□□□ -0.11
YBX1P67809 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.39□□□□□ -0.11
YBX1P67809 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
YBX1P67809 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.39□□□□□ -0.11
YBX1P67809 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
YBX1P67809 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
YBX1P67809 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
YBX1P67809 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
YBX1P67809 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
YBX1P67809 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.39□□□□□ -0.11
YBX1P67809 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.39□□□□□ -0.11
YBX1P67809 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.39□□□□□ -0.11
YBX1P67809 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
YBX1P67809 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
YBX1P67809 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
YBX1P67809 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
YBX1P67809 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
YBX1P67809 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 KRT8P4-201ENST00000509735 1454 ntBASIC14.38□□□□□ -0.11
YBX1P67809 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.38□□□□□ -0.11
YBX1P67809 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
YBX1P67809 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.38□□□□□ -0.11
YBX1P67809 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 RN7SKP175-201ENST00000408472 289 ntBASIC14.38□□□□□ -0.11
YBX1P67809 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.38□□□□□ -0.11
YBX1P67809 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
YBX1P67809 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.38□□□□□ -0.11
YBX1P67809 AC008687.7-202ENST00000637404 953 ntBASIC14.38□□□□□ -0.11
YBX1P67809 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
YBX1P67809 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
YBX1P67809 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 AP000593.2-201ENST00000542775 1433 ntBASIC14.38□□□□□ -0.11
YBX1P67809 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.38□□□□□ -0.11
YBX1P67809 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
YBX1P67809 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
YBX1P67809 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
YBX1P67809 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.38□□□□□ -0.11
YBX1P67809 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
YBX1P67809 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
YBX1P67809 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.37□□□□□ -0.11
YBX1P67809 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.37□□□□□ -0.11
YBX1P67809 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YBX1P67809 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms