Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.06□□□□□ -0.16
SKP1P63208 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.06□□□□□ -0.16
SKP1P63208 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 BNIP3P29-201ENST00000598302 571 ntBASIC14.06□□□□□ -0.16
SKP1P63208 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.06□□□□□ -0.16
SKP1P63208 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.06□□□□□ -0.16
SKP1P63208 AC011447.5-201ENST00000616168 564 ntBASIC14.06□□□□□ -0.16
SKP1P63208 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.06□□□□□ -0.16
SKP1P63208 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
SKP1P63208 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SKP1P63208 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.06□□□□□ -0.16
SKP1P63208 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.06□□□□□ -0.16
SKP1P63208 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SKP1P63208 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SKP1P63208 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.05□□□□□ -0.16
SKP1P63208 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SKP1P63208 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SKP1P63208 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SKP1P63208 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.05□□□□□ -0.16
SKP1P63208 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
SKP1P63208 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 SHC1P1-201ENST00000425230 1745 ntBASIC14.05□□□□□ -0.16
SKP1P63208 AL023775.1-201ENST00000454907 1746 ntBASIC14.05□□□□□ -0.16
SKP1P63208 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.05□□□□□ -0.16
SKP1P63208 CICP23-201ENST00000605013 2741 ntBASIC14.05□□□□□ -0.16
SKP1P63208 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.05□□□□□ -0.16
SKP1P63208 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 BRWD1P1-201ENST00000401091 371 ntBASIC14.05□□□□□ -0.16
SKP1P63208 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.05□□□□□ -0.16
SKP1P63208 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.05□□□□□ -0.16
SKP1P63208 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.05□□□□□ -0.16
SKP1P63208 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.05□□□□□ -0.16
SKP1P63208 AP003171.2-201ENST00000528208 925 ntBASIC14.05□□□□□ -0.16
SKP1P63208 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.05□□□□□ -0.16
SKP1P63208 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.05□□□□□ -0.16
SKP1P63208 MIR4259-201ENST00000584466 101 ntBASIC14.05□□□□□ -0.16
SKP1P63208 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.05□□□□□ -0.16
SKP1P63208 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.05□□□□□ -0.16
SKP1P63208 AC007292.2-201ENST00000593524 1812 ntBASIC14.05□□□□□ -0.16
SKP1P63208 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.05□□□□□ -0.16
SKP1P63208 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SKP1P63208 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.04□□□□□ -0.16
SKP1P63208 ST20-AS1-201ENST00000560255 4223 ntBASIC14.04□□□□□ -0.16
SKP1P63208 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.04□□□□□ -0.16
SKP1P63208 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.04□□□□□ -0.16
SKP1P63208 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
SKP1P63208 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.04□□□□□ -0.16
SKP1P63208 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.04□□□□□ -0.16
SKP1P63208 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SKP1P63208 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 AC010141.1-201ENST00000411585 623 ntBASIC14.04□□□□□ -0.16
SKP1P63208 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.04□□□□□ -0.16
SKP1P63208 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 HIST2H2BB-201ENST00000449108 381 ntBASIC14.04□□□□□ -0.16
SKP1P63208 PFN1P12-201ENST00000455938 534 ntBASIC14.04□□□□□ -0.16
SKP1P63208 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.04□□□□□ -0.16
SKP1P63208 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.04□□□□□ -0.16
SKP1P63208 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SKP1P63208 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SKP1P63208 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.04□□□□□ -0.16
SKP1P63208 AL583810.1-201ENST00000553344 1045 ntBASIC14.04□□□□□ -0.16
SKP1P63208 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.04□□□□□ -0.16
SKP1P63208 MIR4741-201ENST00000579822 90 ntBASIC14.04□□□□□ -0.16
SKP1P63208 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.04□□□□□ -0.16
SKP1P63208 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.04□□□□□ -0.16
SKP1P63208 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.04□□□□□ -0.16
SKP1P63208 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SKP1P63208 AL358472.3-201ENST00000608147 415 ntBASIC14.04□□□□□ -0.16
SKP1P63208 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms