Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SMIM11AP58511 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 INTS4P2-202ENST00000614726 2019 ntBASIC13.66□□□□□ -0.22
SMIM11AP58511 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SMIM11AP58511 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 AL731571.1-201ENST00000617058 5428 ntBASIC13.66□□□□□ -0.22
SMIM11AP58511 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.66□□□□□ -0.22
SMIM11AP58511 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 LRRC59-203ENST00000576448 1531 ntBASIC13.66□□□□□ -0.22
SMIM11AP58511 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SMIM11AP58511 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.66□□□□□ -0.22
SMIM11AP58511 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.66□□□□□ -0.22
SMIM11AP58511 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.66□□□□□ -0.22
SMIM11AP58511 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.66□□□□□ -0.22
SMIM11AP58511 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.66□□□□□ -0.22
SMIM11AP58511 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.66□□□□□ -0.22
SMIM11AP58511 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.66□□□□□ -0.22
SMIM11AP58511 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.66□□□□□ -0.22
SMIM11AP58511 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.66□□□□□ -0.22
SMIM11AP58511 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SMIM11AP58511 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.66□□□□□ -0.22
SMIM11AP58511 AL390955.2-201ENST00000603032 514 ntBASIC13.66□□□□□ -0.22
SMIM11AP58511 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.66□□□□□ -0.22
SMIM11AP58511 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
SMIM11AP58511 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SMIM11AP58511 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM11AP58511 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SMIM11AP58511 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SMIM11AP58511 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.65□□□□□ -0.22
SMIM11AP58511 AC015818.8-201ENST00000587907 1519 ntBASIC13.65□□□□□ -0.22
SMIM11AP58511 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SMIM11AP58511 AC005252.3-201ENST00000623855 2258 ntBASIC13.65□□□□□ -0.22
SMIM11AP58511 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SMIM11AP58511 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SMIM11AP58511 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SMIM11AP58511 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.65□□□□□ -0.22
SMIM11AP58511 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.65□□□□□ -0.22
SMIM11AP58511 AP000347.1-202ENST00000435868 847 ntBASIC13.65□□□□□ -0.22
SMIM11AP58511 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.65□□□□□ -0.22
SMIM11AP58511 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.65□□□□□ -0.22
SMIM11AP58511 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.65□□□□□ -0.22
SMIM11AP58511 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SMIM11AP58511 AP001582.1-201ENST00000525856 295 ntBASIC13.65□□□□□ -0.22
SMIM11AP58511 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.65□□□□□ -0.22
SMIM11AP58511 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.65□□□□□ -0.22
SMIM11AP58511 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.65□□□□□ -0.22
SMIM11AP58511 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.65□□□□□ -0.22
SMIM11AP58511 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SMIM11AP58511 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 AC012617.1-204ENST00000586340 2305 ntBASIC13.65□□□□□ -0.22
SMIM11AP58511 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms