Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.52□□□□□ -0.08
CLDN2P57739 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN2P57739 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CLDN2P57739 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN2P57739 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.52□□□□□ -0.08
CLDN2P57739 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN2P57739 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN2P57739 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN2P57739 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN2P57739 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN2P57739 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN2P57739 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN2P57739 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.52□□□□□ -0.09
CLDN2P57739 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN2P57739 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.52□□□□□ -0.09
CLDN2P57739 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.52□□□□□ -0.09
CLDN2P57739 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN2P57739 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.52□□□□□ -0.09
CLDN2P57739 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.52□□□□□ -0.09
CLDN2P57739 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.52□□□□□ -0.09
CLDN2P57739 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CLDN2P57739 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.52□□□□□ -0.09
CLDN2P57739 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.52□□□□□ -0.09
CLDN2P57739 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.52□□□□□ -0.09
CLDN2P57739 RN7SL190P-201ENST00000582519 257 ntBASIC14.52□□□□□ -0.09
CLDN2P57739 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.52□□□□□ -0.09
CLDN2P57739 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CLDN2P57739 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.52□□□□□ -0.09
CLDN2P57739 AC133540.1-201ENST00000620845 1019 ntBASIC14.52□□□□□ -0.09
CLDN2P57739 AC092299.1-201ENST00000632679 757 ntBASIC14.52□□□□□ -0.09
CLDN2P57739 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.52□□□□□ -0.09
CLDN2P57739 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN2P57739 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.52□□□□□ -0.09
CLDN2P57739 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CLDN2P57739 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN2P57739 AJ011931.1-201ENST00000618749 2492 ntBASIC14.52□□□□□ -0.09
CLDN2P57739 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN2P57739 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.52□□□□□ -0.09
CLDN2P57739 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN2P57739 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN2P57739 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN2P57739 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 KRT8P28-201ENST00000433288 1390 ntBASIC14.51□□□□□ -0.09
CLDN2P57739 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN2P57739 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN2P57739 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN2P57739 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN2P57739 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.51□□□□□ -0.09
CLDN2P57739 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.51□□□□□ -0.09
CLDN2P57739 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN2P57739 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN2P57739 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.51□□□□□ -0.09
CLDN2P57739 IGLV3-15-201ENST00000518356 244 ntBASIC14.51□□□□□ -0.09
CLDN2P57739 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN2P57739 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.51□□□□□ -0.09
CLDN2P57739 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.51□□□□□ -0.09
CLDN2P57739 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
CLDN2P57739 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.51□□□□□ -0.09
CLDN2P57739 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN2P57739 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN2P57739 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.51□□□□□ -0.09
CLDN2P57739 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.51□□□□□ -0.09
CLDN2P57739 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.51□□□□□ -0.09
CLDN2P57739 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN2P57739 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN2P57739 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN2P57739 AC018529.2-202ENST00000611482 3087 ntBASIC14.51□□□□□ -0.09
CLDN2P57739 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLDN2P57739 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN2P57739 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN2P57739 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN2P57739 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN2P57739 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN2P57739 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms