Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.91□□□□□ -0.34
CLDN12P56749 AP001059.3-201ENST00000619053 235 ntBASIC12.91□□□□□ -0.34
CLDN12P56749 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.91□□□□□ -0.34
CLDN12P56749 HSPA8P5-201ENST00000456928 2069 ntBASIC12.91□□□□□ -0.34
CLDN12P56749 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CLDN12P56749 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.91□□□□□ -0.34
CLDN12P56749 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDN12P56749 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
CLDN12P56749 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.91□□□□□ -0.34
CLDN12P56749 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CLDN12P56749 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 MYADML-201ENST00000474610 2147 ntBASIC12.91□□□□□ -0.34
CLDN12P56749 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
CLDN12P56749 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.9□□□□□ -0.34
CLDN12P56749 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CLDN12P56749 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
CLDN12P56749 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
CLDN12P56749 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.9□□□□□ -0.34
CLDN12P56749 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CLDN12P56749 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 AC015818.8-201ENST00000587907 1519 ntBASIC12.9□□□□□ -0.34
CLDN12P56749 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDN12P56749 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.9□□□□□ -0.34
CLDN12P56749 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.9□□□□□ -0.34
CLDN12P56749 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDN12P56749 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.9□□□□□ -0.34
CLDN12P56749 SDHAP3-202ENST00000515467 728 ntBASIC12.9□□□□□ -0.34
CLDN12P56749 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDN12P56749 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CLDN12P56749 AC044860.1-202ENST00000559481 777 ntBASIC12.9□□□□□ -0.34
CLDN12P56749 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.9□□□□□ -0.34
CLDN12P56749 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 AL138828.2-201ENST00000615812 383 ntBASIC12.9□□□□□ -0.34
CLDN12P56749 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
CLDN12P56749 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
CLDN12P56749 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
CLDN12P56749 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 AGAP10P-201ENST00000454844 2418 ntBASIC12.9□□□□□ -0.34
CLDN12P56749 AC020658.7-201ENST00000624274 2442 ntBASIC12.9□□□□□ -0.34
CLDN12P56749 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CLDN12P56749 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN12P56749 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.9□□□□□ -0.35
CLDN12P56749 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN12P56749 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN12P56749 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN12P56749 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CLDN12P56749 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.89□□□□□ -0.35
CLDN12P56749 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 AC073548.1-201ENST00000624088 1882 ntBASIC12.89□□□□□ -0.35
CLDN12P56749 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.89□□□□□ -0.35
CLDN12P56749 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.89□□□□□ -0.35
CLDN12P56749 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CLDN12P56749 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.89□□□□□ -0.35
CLDN12P56749 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.89□□□□□ -0.35
CLDN12P56749 HLA-V-204ENST00000476601 1289 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms