Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
AP1S2P56377 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S2P56377 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.39□□□□□ -0.11
AP1S2P56377 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
AP1S2P56377 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
AP1S2P56377 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S2P56377 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
AP1S2P56377 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.39□□□□□ -0.11
AP1S2P56377 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.39□□□□□ -0.11
AP1S2P56377 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.39□□□□□ -0.11
AP1S2P56377 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S2P56377 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.39□□□□□ -0.11
AP1S2P56377 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.39□□□□□ -0.11
AP1S2P56377 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.39□□□□□ -0.11
AP1S2P56377 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
AP1S2P56377 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.39□□□□□ -0.11
AP1S2P56377 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.39□□□□□ -0.11
AP1S2P56377 AC073413.1-201ENST00000603927 732 ntBASIC14.39□□□□□ -0.11
AP1S2P56377 AL162274.1-201ENST00000617191 1098 ntBASIC14.39□□□□□ -0.11
AP1S2P56377 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.39□□□□□ -0.11
AP1S2P56377 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.39□□□□□ -0.11
AP1S2P56377 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
AP1S2P56377 AC152010.1-201ENST00000415779 2006 ntBASIC14.39□□□□□ -0.11
AP1S2P56377 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S2P56377 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
AP1S2P56377 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.39□□□□□ -0.11
AP1S2P56377 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.38□□□□□ -0.11
AP1S2P56377 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.38□□□□□ -0.11
AP1S2P56377 AC139749.1-202ENST00000617529 3139 ntBASIC14.38□□□□□ -0.11
AP1S2P56377 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
AP1S2P56377 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.38□□□□□ -0.11
AP1S2P56377 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
AP1S2P56377 AL355994.2-201ENST00000447882 704 ntBASIC14.38□□□□□ -0.11
AP1S2P56377 AL035414.1-201ENST00000451327 857 ntBASIC14.38□□□□□ -0.11
AP1S2P56377 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
AP1S2P56377 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
AP1S2P56377 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.38□□□□□ -0.11
AP1S2P56377 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.38□□□□□ -0.11
AP1S2P56377 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.38□□□□□ -0.11
AP1S2P56377 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.38□□□□□ -0.11
AP1S2P56377 CICP4-201ENST00000447359 2812 ntBASIC14.38□□□□□ -0.11
AP1S2P56377 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.38□□□□□ -0.11
AP1S2P56377 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
AP1S2P56377 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.38□□□□□ -0.11
AP1S2P56377 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AP1S2P56377 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AP1S2P56377 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S2P56377 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
AP1S2P56377 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AP1S2P56377 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.38□□□□□ -0.11
AP1S2P56377 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
AP1S2P56377 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
AP1S2P56377 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S2P56377 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S2P56377 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
AP1S2P56377 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.37□□□□□ -0.11
AP1S2P56377 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S2P56377 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
AP1S2P56377 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S2P56377 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.37□□□□□ -0.11
AP1S2P56377 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms