Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL358472.3-201ENST00000608147 415 ntBASIC11□□□□□ -0.65
CMC4P56277 AP001002.3-201ENST00000623482 206 ntBASIC11□□□□□ -0.65
CMC4P56277 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC11□□□□□ -0.65
CMC4P56277 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11□□□□□ -0.65
CMC4P56277 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CMC4P56277 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11□□□□□ -0.65
CMC4P56277 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CMC4P56277 AL023775.1-201ENST00000454907 1746 ntBASIC11□□□□□ -0.65
CMC4P56277 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CMC4P56277 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC11□□□□□ -0.65
CMC4P56277 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC11□□□□□ -0.65
CMC4P56277 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CMC4P56277 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CMC4P56277 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11□□□□□ -0.65
CMC4P56277 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CMC4P56277 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CMC4P56277 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11□□□□□ -0.65
CMC4P56277 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC11□□□□□ -0.65
CMC4P56277 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
CMC4P56277 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC10.99□□□□□ -0.65
CMC4P56277 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
CMC4P56277 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC10.99□□□□□ -0.65
CMC4P56277 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC10.99□□□□□ -0.65
CMC4P56277 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CMC4P56277 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.99□□□□□ -0.65
CMC4P56277 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
CMC4P56277 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC10.99□□□□□ -0.65
CMC4P56277 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 AC015688.4-201ENST00000580780 1647 ntBASIC10.99□□□□□ -0.65
CMC4P56277 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC10.99□□□□□ -0.65
CMC4P56277 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC10.99□□□□□ -0.65
CMC4P56277 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC10.99□□□□□ -0.65
CMC4P56277 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC10.99□□□□□ -0.65
CMC4P56277 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 MIR326-201ENST00000362220 95 ntBASIC10.99□□□□□ -0.65
CMC4P56277 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 PGF-202ENST00000405431 666 ntTSL 5 BASIC10.99□□□□□ -0.65
CMC4P56277 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 AL354877.1-201ENST00000424412 413 ntBASIC10.99□□□□□ -0.65
CMC4P56277 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 PTPA-218ENST00000435132 618 ntTSL 2 BASIC10.99□□□□□ -0.65
CMC4P56277 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC10.99□□□□□ -0.65
CMC4P56277 HIST2H2BB-201ENST00000449108 381 ntBASIC10.99□□□□□ -0.65
CMC4P56277 BNIP3P42-201ENST00000454982 569 ntBASIC10.99□□□□□ -0.65
CMC4P56277 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 AC119751.2-201ENST00000504529 210 ntBASIC10.99□□□□□ -0.65
CMC4P56277 AC100850.1-201ENST00000506768 649 ntBASIC10.99□□□□□ -0.65
CMC4P56277 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC10.99□□□□□ -0.65
CMC4P56277 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC10.99□□□□□ -0.65
CMC4P56277 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
CMC4P56277 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC10.99□□□□□ -0.65
CMC4P56277 MIR4741-201ENST00000579822 90 ntBASIC10.99□□□□□ -0.65
CMC4P56277 BNIP3P29-201ENST00000598302 571 ntBASIC10.99□□□□□ -0.65
CMC4P56277 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC10.99□□□□□ -0.65
CMC4P56277 KLK11-210ENST00000600362 759 ntTSL 3 BASIC10.99□□□□□ -0.65
CMC4P56277 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC10.99□□□□□ -0.65
CMC4P56277 AC011447.5-201ENST00000616168 564 ntBASIC10.99□□□□□ -0.65
CMC4P56277 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC10.99□□□□□ -0.65
CMC4P56277 HYMAI-201ENST00000635591 3347 ntBASIC10.99□□□□□ -0.65
CMC4P56277 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
CMC4P56277 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC10.99□□□□□ -0.65
CMC4P56277 AC020910.5-201ENST00000623668 1865 ntBASIC10.99□□□□□ -0.65
CMC4P56277 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC10.99□□□□□ -0.65
CMC4P56277 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC10.99□□□□□ -0.65
CMC4P56277 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
CMC4P56277 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC10.99□□□□□ -0.65
CMC4P56277 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC10.99□□□□□ -0.65
CMC4P56277 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
CMC4P56277 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CMC4P56277 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 MVK-214ENST00000629016 1591 ntTSL 5 BASIC10.99□□□□□ -0.65
CMC4P56277 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms