Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.19
CDH12P55289 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CDH12P55289 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDH12P55289 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDH12P55289 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDH12P55289 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH12P55289 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH12P55289 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH12P55289 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CDH12P55289 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CDH12P55289 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH12P55289 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH12P55289 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH12P55289 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH12P55289 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH12P55289 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH12P55289 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH12P55289 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH12P55289 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH12P55289 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CDH12P55289 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH12P55289 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH12P55289 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH12P55289 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH12P55289 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH12P55289 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH12P55289 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CDH12P55289 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CDH12P55289 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 INTS4P2-202ENST00000614726 2019 ntBASIC13.83□□□□□ -0.2
CDH12P55289 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH12P55289 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CDH12P55289 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH12P55289 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CDH12P55289 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CDH12P55289 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH12P55289 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CDH12P55289 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH12P55289 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH12P55289 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CDH12P55289 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CDH12P55289 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CDH12P55289 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH12P55289 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.82□□□□□ -0.2
CDH12P55289 NUS1P3-201ENST00000423502 862 ntBASIC13.82□□□□□ -0.2
CDH12P55289 PMS2P2-201ENST00000425039 1128 ntBASIC13.82□□□□□ -0.2
CDH12P55289 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.82□□□□□ -0.2
CDH12P55289 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.82□□□□□ -0.2
CDH12P55289 AC092183.1-201ENST00000469884 875 ntBASIC13.82□□□□□ -0.2
CDH12P55289 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH12P55289 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.82□□□□□ -0.2
CDH12P55289 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH12P55289 AC120045.2-201ENST00000567334 178 ntBASIC13.82□□□□□ -0.2
CDH12P55289 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH12P55289 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CDH12P55289 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.82□□□□□ -0.2
CDH12P55289 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CDH12P55289 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH12P55289 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms