Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SLC25A1P53007 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.12□□□□□ -0.31
SLC25A1P53007 AC020910.5-201ENST00000623668 1865 ntBASIC13.12□□□□□ -0.31
SLC25A1P53007 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SLC25A1P53007 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.12□□□□□ -0.31
SLC25A1P53007 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SLC25A1P53007 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SLC25A1P53007 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.12□□□□□ -0.31
SLC25A1P53007 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
SLC25A1P53007 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.12□□□□□ -0.31
SLC25A1P53007 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
SLC25A1P53007 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.12□□□□□ -0.31
SLC25A1P53007 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.12□□□□□ -0.31
SLC25A1P53007 PUDPP3-201ENST00000445368 636 ntBASIC13.12□□□□□ -0.31
SLC25A1P53007 TSPY16P-201ENST00000449843 468 ntBASIC13.12□□□□□ -0.31
SLC25A1P53007 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.12□□□□□ -0.31
SLC25A1P53007 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SLC25A1P53007 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.12□□□□□ -0.31
SLC25A1P53007 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.12□□□□□ -0.31
SLC25A1P53007 AC008494.3-201ENST00000606615 944 ntBASIC13.12□□□□□ -0.31
SLC25A1P53007 AC145423.3-201ENST00000615987 467 ntBASIC13.12□□□□□ -0.31
SLC25A1P53007 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.12□□□□□ -0.31
SLC25A1P53007 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.12□□□□□ -0.31
SLC25A1P53007 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.12□□□□□ -0.31
SLC25A1P53007 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.12□□□□□ -0.31
SLC25A1P53007 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.12□□□□□ -0.31
SLC25A1P53007 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 AP000593.2-201ENST00000542775 1433 ntBASIC13.12□□□□□ -0.31
SLC25A1P53007 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SLC25A1P53007 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SLC25A1P53007 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.12□□□□□ -0.31
SLC25A1P53007 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.12□□□□□ -0.31
SLC25A1P53007 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.12□□□□□ -0.31
SLC25A1P53007 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SLC25A1P53007 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SLC25A1P53007 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC25A1P53007 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.11□□□□□ -0.31
SLC25A1P53007 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SLC25A1P53007 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.11□□□□□ -0.31
SLC25A1P53007 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.11□□□□□ -0.31
SLC25A1P53007 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC25A1P53007 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
SLC25A1P53007 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SLC25A1P53007 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.11□□□□□ -0.31
SLC25A1P53007 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.11□□□□□ -0.31
SLC25A1P53007 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.11□□□□□ -0.31
SLC25A1P53007 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.11□□□□□ -0.31
SLC25A1P53007 AC012441.1-201ENST00000446669 685 ntBASIC13.11□□□□□ -0.31
SLC25A1P53007 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.11□□□□□ -0.31
SLC25A1P53007 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC25A1P53007 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SLC25A1P53007 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SLC25A1P53007 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
SLC25A1P53007 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.11□□□□□ -0.31
SLC25A1P53007 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms