Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.36□□□□□ -0.11
PDX1P52945 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.36□□□□□ -0.11
PDX1P52945 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
PDX1P52945 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.36□□□□□ -0.11
PDX1P52945 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PDX1P52945 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 AC020910.5-201ENST00000623668 1865 ntBASIC14.35□□□□□ -0.11
PDX1P52945 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PDX1P52945 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 AJ011931.1-201ENST00000618749 2492 ntBASIC14.35□□□□□ -0.11
PDX1P52945 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
PDX1P52945 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PDX1P52945 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.35□□□□□ -0.11
PDX1P52945 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.35□□□□□ -0.11
PDX1P52945 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 RN7SKP230-201ENST00000365642 335 ntBASIC14.35□□□□□ -0.11
PDX1P52945 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.35□□□□□ -0.11
PDX1P52945 MAGEA5-201ENST00000446757 942 ntBASIC14.35□□□□□ -0.11
PDX1P52945 EEF1DP6-201ENST00000449232 372 ntBASIC14.35□□□□□ -0.11
PDX1P52945 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.35□□□□□ -0.11
PDX1P52945 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.35□□□□□ -0.11
PDX1P52945 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 AC100827.2-201ENST00000563214 1194 ntBASIC14.35□□□□□ -0.11
PDX1P52945 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.35□□□□□ -0.11
PDX1P52945 MIR5572-201ENST00000583188 137 ntBASIC14.35□□□□□ -0.11
PDX1P52945 U62317.3-201ENST00000608319 855 ntBASIC14.35□□□□□ -0.11
PDX1P52945 AC090164.2-201ENST00000611487 516 ntBASIC14.35□□□□□ -0.11
PDX1P52945 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.35□□□□□ -0.11
PDX1P52945 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PDX1P52945 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
PDX1P52945 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.35□□□□□ -0.11
PDX1P52945 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.35□□□□□ -0.11
PDX1P52945 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PDX1P52945 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.35□□□□□ -0.11
PDX1P52945 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PDX1P52945 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 AP000845.1-201ENST00000581677 2131 ntBASIC14.35□□□□□ -0.11
PDX1P52945 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PDX1P52945 CICP23-201ENST00000605013 2741 ntBASIC14.35□□□□□ -0.11
PDX1P52945 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDX1P52945 AC106881.1-201ENST00000605849 3329 ntBASIC14.35□□□□□ -0.11
PDX1P52945 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PDX1P52945 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.34□□□□□ -0.11
PDX1P52945 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PDX1P52945 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.34□□□□□ -0.11
PDX1P52945 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PDX1P52945 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PDX1P52945 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.34□□□□□ -0.11
PDX1P52945 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.34□□□□□ -0.11
PDX1P52945 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 AL596276.2-201ENST00000447525 331 ntBASIC14.34□□□□□ -0.11
PDX1P52945 RPL18P13-201ENST00000478088 569 ntBASIC14.34□□□□□ -0.11
PDX1P52945 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.34□□□□□ -0.11
PDX1P52945 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.34□□□□□ -0.11
PDX1P52945 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.34□□□□□ -0.11
PDX1P52945 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.34□□□□□ -0.11
PDX1P52945 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 AC103988.2-201ENST00000561804 725 ntBASIC14.34□□□□□ -0.11
PDX1P52945 DUX4L46-201ENST00000566845 751 ntBASIC14.34□□□□□ -0.11
PDX1P52945 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PDX1P52945 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.34□□□□□ -0.11
PDX1P52945 AC097376.2-205ENST00000610159 5334 ntBASIC14.34□□□□□ -0.11
PDX1P52945 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms