Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
USP11P51784 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.61■□□□□ 0.25
USP11P51784 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.61■□□□□ 0.25
USP11P51784 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
USP11P51784 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.61■□□□□ 0.25
USP11P51784 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.61■□□□□ 0.25
USP11P51784 AP001258.2-201ENST00000529891 490 ntBASIC16.61■□□□□ 0.25
USP11P51784 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.61■□□□□ 0.25
USP11P51784 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
USP11P51784 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.61■□□□□ 0.25
USP11P51784 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.61■□□□□ 0.25
USP11P51784 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 FAM90A7P-201ENST00000382628 1395 ntBASIC16.61■□□□□ 0.25
USP11P51784 FAM90A23P-201ENST00000400136 1395 ntBASIC16.61■□□□□ 0.25
USP11P51784 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
USP11P51784 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.61■□□□□ 0.25
USP11P51784 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.61■□□□□ 0.25
USP11P51784 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
USP11P51784 INTS4P1-203ENST00000641008 3683 ntBASIC16.6■□□□□ 0.25
USP11P51784 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.6■□□□□ 0.25
USP11P51784 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.6■□□□□ 0.25
USP11P51784 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
USP11P51784 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.6■□□□□ 0.25
USP11P51784 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
USP11P51784 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
USP11P51784 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.6■□□□□ 0.25
USP11P51784 AC104073.2-201ENST00000453737 312 ntBASIC16.6■□□□□ 0.25
USP11P51784 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.6■□□□□ 0.25
USP11P51784 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.6■□□□□ 0.25
USP11P51784 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
USP11P51784 AL136295.7-201ENST00000619226 1200 ntBASIC16.6■□□□□ 0.25
USP11P51784 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.6■□□□□ 0.25
USP11P51784 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.6■□□□□ 0.25
USP11P51784 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
USP11P51784 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP11P51784 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.6■□□□□ 0.25
USP11P51784 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
USP11P51784 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.6■□□□□ 0.25
USP11P51784 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
USP11P51784 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
USP11P51784 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.6■□□□□ 0.25
USP11P51784 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.59■□□□□ 0.25
USP11P51784 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
USP11P51784 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 AC090505.1-201ENST00000430515 1834 ntBASIC16.59■□□□□ 0.25
USP11P51784 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.59■□□□□ 0.25
USP11P51784 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
USP11P51784 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
USP11P51784 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
USP11P51784 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.59■□□□□ 0.25
USP11P51784 KRT8P13-201ENST00000463294 1010 ntBASIC16.59■□□□□ 0.25
USP11P51784 AC006122.1-201ENST00000493323 440 ntBASIC16.59■□□□□ 0.25
USP11P51784 AC005740.2-201ENST00000511085 419 ntBASIC16.59■□□□□ 0.25
USP11P51784 ZNF767P-206ENST00000513792 565 ntBASIC16.59■□□□□ 0.25
USP11P51784 SCARNA21-201ENST00000517026 139 ntBASIC16.59■□□□□ 0.25
USP11P51784 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.59■□□□□ 0.25
USP11P51784 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.59■□□□□ 0.25
USP11P51784 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
USP11P51784 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.59■□□□□ 0.25
USP11P51784 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.59■□□□□ 0.25
USP11P51784 SNORD3B-2-202ENST00000571722 791 ntBASIC16.59■□□□□ 0.25
USP11P51784 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms