Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARCN1P48444 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARCN1P48444 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ARCN1P48444 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ARCN1P48444 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.8□□□□□ -0.04
ARCN1P48444 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ARCN1P48444 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARCN1P48444 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.8□□□□□ -0.04
ARCN1P48444 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.8□□□□□ -0.04
ARCN1P48444 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARCN1P48444 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARCN1P48444 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ARCN1P48444 AC011498.7-201ENST00000624986 2027 ntBASIC14.8□□□□□ -0.04
ARCN1P48444 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARCN1P48444 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARCN1P48444 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
ARCN1P48444 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.79□□□□□ -0.04
ARCN1P48444 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 TPM3P8-201ENST00000330554 643 ntBASIC14.79□□□□□ -0.04
ARCN1P48444 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
ARCN1P48444 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.79□□□□□ -0.04
ARCN1P48444 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.79□□□□□ -0.04
ARCN1P48444 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.79□□□□□ -0.04
ARCN1P48444 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.79□□□□□ -0.04
ARCN1P48444 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
ARCN1P48444 KLF2P4-201ENST00000451959 1225 ntBASIC14.79□□□□□ -0.04
ARCN1P48444 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
ARCN1P48444 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.79□□□□□ -0.04
ARCN1P48444 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.79□□□□□ -0.04
ARCN1P48444 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.79□□□□□ -0.04
ARCN1P48444 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.79□□□□□ -0.04
ARCN1P48444 AC133552.6-201ENST00000613406 534 ntBASIC14.79□□□□□ -0.04
ARCN1P48444 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ARCN1P48444 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.79□□□□□ -0.04
ARCN1P48444 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ARCN1P48444 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.79□□□□□ -0.04
ARCN1P48444 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARCN1P48444 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
ARCN1P48444 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.78□□□□□ -0.04
ARCN1P48444 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ARCN1P48444 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.78□□□□□ -0.04
ARCN1P48444 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
ARCN1P48444 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ARCN1P48444 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.78□□□□□ -0.04
ARCN1P48444 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ARCN1P48444 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ARCN1P48444 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 CICP16-201ENST00000502609 2813 ntBASIC14.78□□□□□ -0.04
ARCN1P48444 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.78□□□□□ -0.04
ARCN1P48444 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ARCN1P48444 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
ARCN1P48444 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.78□□□□□ -0.04
ARCN1P48444 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 KRT223P-202ENST00000449164 1292 ntBASIC14.78□□□□□ -0.04
ARCN1P48444 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.78□□□□□ -0.04
ARCN1P48444 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.78□□□□□ -0.04
ARCN1P48444 RNA5SP486-201ENST00000515961 83 ntBASIC14.78□□□□□ -0.04
ARCN1P48444 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ARCN1P48444 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.78□□□□□ -0.04
ARCN1P48444 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.78□□□□□ -0.04
ARCN1P48444 COX11-210ENST00000639671 696 ntBASIC14.78□□□□□ -0.04
ARCN1P48444 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARCN1P48444 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms