Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NEDD4P46934 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.28■□□□□ 0.36
NEDD4P46934 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD4P46934 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.28■□□□□ 0.36
NEDD4P46934 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NEDD4P46934 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD4P46934 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.28■□□□□ 0.36
NEDD4P46934 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.28■□□□□ 0.36
NEDD4P46934 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD4P46934 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD4P46934 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD4P46934 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD4P46934 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.28■□□□□ 0.36
NEDD4P46934 SERPINA13P-202ENST00000478994 924 ntBASIC17.28■□□□□ 0.36
NEDD4P46934 AC099548.2-209ENST00000480264 625 ntBASIC17.28■□□□□ 0.36
NEDD4P46934 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD4P46934 SORD2P-201ENST00000558556 1069 ntBASIC17.28■□□□□ 0.36
NEDD4P46934 AC027237.1-201ENST00000560942 655 ntBASIC17.28■□□□□ 0.36
NEDD4P46934 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.28■□□□□ 0.36
NEDD4P46934 MIR4525-201ENST00000580000 75 ntBASIC17.28■□□□□ 0.36
NEDD4P46934 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.28■□□□□ 0.36
NEDD4P46934 AL451050.2-201ENST00000606967 682 ntBASIC17.28■□□□□ 0.36
NEDD4P46934 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.28■□□□□ 0.36
NEDD4P46934 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.28■□□□□ 0.36
NEDD4P46934 RN7SL832P-201ENST00000607781 1756 ntBASIC17.28■□□□□ 0.36
NEDD4P46934 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD4P46934 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD4P46934 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NEDD4P46934 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD4P46934 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD4P46934 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD4P46934 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NEDD4P46934 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD4P46934 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD4P46934 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD4P46934 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.27■□□□□ 0.36
NEDD4P46934 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD4P46934 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD4P46934 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD4P46934 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD4P46934 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD4P46934 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD4P46934 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD4P46934 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.27■□□□□ 0.36
NEDD4P46934 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.27■□□□□ 0.36
NEDD4P46934 NKAIN1P1-201ENST00000435754 582 ntBASIC17.27■□□□□ 0.36
NEDD4P46934 AC012441.2-201ENST00000444843 739 ntBASIC17.27■□□□□ 0.36
NEDD4P46934 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD4P46934 TUBB8P8-201ENST00000458717 1058 ntBASIC17.27■□□□□ 0.36
NEDD4P46934 SCARNA21-201ENST00000517026 139 ntBASIC17.27■□□□□ 0.36
NEDD4P46934 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD4P46934 AC126915.1-201ENST00000522847 1038 ntBASIC17.27■□□□□ 0.36
NEDD4P46934 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.27■□□□□ 0.36
NEDD4P46934 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.27■□□□□ 0.36
NEDD4P46934 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.27■□□□□ 0.36
NEDD4P46934 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
NEDD4P46934 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD4P46934 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.27■□□□□ 0.36
NEDD4P46934 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD4P46934 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.27■□□□□ 0.36
NEDD4P46934 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.27■□□□□ 0.36
NEDD4P46934 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD4P46934 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD4P46934 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.35
NEDD4P46934 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.27■□□□□ 0.35
NEDD4P46934 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NEDD4P46934 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NEDD4P46934 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
NEDD4P46934 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NEDD4P46934 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NEDD4P46934 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
NEDD4P46934 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
NEDD4P46934 FAM90A7P-201ENST00000382628 1395 ntBASIC17.27■□□□□ 0.35
NEDD4P46934 FAM90A23P-201ENST00000400136 1395 ntBASIC17.27■□□□□ 0.35
NEDD4P46934 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.27■□□□□ 0.35
NEDD4P46934 AC144522.1-201ENST00000625111 1658 ntBASIC17.26■□□□□ 0.35
NEDD4P46934 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD4P46934 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD4P46934 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD4P46934 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD4P46934 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD4P46934 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.26■□□□□ 0.35
NEDD4P46934 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD4P46934 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD4P46934 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.26■□□□□ 0.35
NEDD4P46934 RBM8B-201ENST00000555532 525 ntBASIC17.26■□□□□ 0.35
NEDD4P46934 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.26■□□□□ 0.35
NEDD4P46934 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.26■□□□□ 0.35
NEDD4P46934 GPR182-203ENST00000622922 591 ntBASIC17.26■□□□□ 0.35
NEDD4P46934 AC068587.8-201ENST00000641239 219 ntBASIC17.26■□□□□ 0.35
NEDD4P46934 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.26■□□□□ 0.35
NEDD4P46934 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD4P46934 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.26■□□□□ 0.35
NEDD4P46934 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD4P46934 GRK6P1-201ENST00000400595 1711 ntBASIC17.26■□□□□ 0.35
NEDD4P46934 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD4P46934 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
NEDD4P46934 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NEDD4P46934 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms