Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
COPB2P35606 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COPB2P35606 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.82■□□□□ 0.28
COPB2P35606 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.82■□□□□ 0.28
COPB2P35606 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
COPB2P35606 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.82■□□□□ 0.28
COPB2P35606 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 AL590440.2-201ENST00000641973 1595 ntBASIC16.81■□□□□ 0.28
COPB2P35606 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
COPB2P35606 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
COPB2P35606 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.81■□□□□ 0.28
COPB2P35606 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.81■□□□□ 0.28
COPB2P35606 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.81■□□□□ 0.28
COPB2P35606 AL627231.1-201ENST00000394467 1125 ntBASIC16.81■□□□□ 0.28
COPB2P35606 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 TSPY25P-201ENST00000429463 745 ntBASIC16.81■□□□□ 0.28
COPB2P35606 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 AC069218.1-201ENST00000435269 762 ntBASIC16.81■□□□□ 0.28
COPB2P35606 AC098935.1-201ENST00000446057 611 ntBASIC16.81■□□□□ 0.28
COPB2P35606 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.81■□□□□ 0.28
COPB2P35606 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.81■□□□□ 0.28
COPB2P35606 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.81■□□□□ 0.28
COPB2P35606 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
COPB2P35606 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.81■□□□□ 0.28
COPB2P35606 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.81■□□□□ 0.28
COPB2P35606 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.81■□□□□ 0.28
COPB2P35606 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.81■□□□□ 0.28
COPB2P35606 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
COPB2P35606 MIR7845-201ENST00000618396 99 ntBASIC16.81■□□□□ 0.28
COPB2P35606 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
COPB2P35606 AC092135.3-201ENST00000624151 1846 ntBASIC16.81■□□□□ 0.28
COPB2P35606 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.81■□□□□ 0.28
COPB2P35606 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.81■□□□□ 0.28
COPB2P35606 AC018629.1-201ENST00000623381 1736 ntBASIC16.81■□□□□ 0.28
COPB2P35606 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
COPB2P35606 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.81■□□□□ 0.28
COPB2P35606 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.81■□□□□ 0.28
COPB2P35606 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COPB2P35606 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.8■□□□□ 0.28
COPB2P35606 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.8■□□□□ 0.28
COPB2P35606 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 LINC01101-201ENST00000622953 1884 ntBASIC16.8■□□□□ 0.28
COPB2P35606 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
COPB2P35606 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
COPB2P35606 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 AL136172.1-201ENST00000598590 1394 ntBASIC16.8■□□□□ 0.28
COPB2P35606 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.8■□□□□ 0.28
COPB2P35606 NORAD-201ENST00000565493 5339 ntBASIC16.8■□□□□ 0.28
COPB2P35606 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.8■□□□□ 0.28
COPB2P35606 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.8■□□□□ 0.28
COPB2P35606 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
COPB2P35606 KRT18P36-201ENST00000411618 1276 ntBASIC16.8■□□□□ 0.28
COPB2P35606 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.8■□□□□ 0.28
COPB2P35606 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.8■□□□□ 0.28
COPB2P35606 AL592076.1-201ENST00000424448 303 ntBASIC16.8■□□□□ 0.28
COPB2P35606 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPB2P35606 FGFR3P1-201ENST00000449999 601 ntBASIC16.8■□□□□ 0.28
COPB2P35606 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.8■□□□□ 0.28
COPB2P35606 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.8■□□□□ 0.28
COPB2P35606 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms