Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RPA3P35244 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.99□□□□□ -0.01
RPA3P35244 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.99□□□□□ -0.01
RPA3P35244 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.99□□□□□ -0.01
RPA3P35244 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RPA3P35244 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.99□□□□□ -0.01
RPA3P35244 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.99□□□□□ -0.01
RPA3P35244 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.99□□□□□ -0.01
RPA3P35244 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPA3P35244 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPA3P35244 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPA3P35244 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RPA3P35244 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.98□□□□□ -0.01
RPA3P35244 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RPA3P35244 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.98□□□□□ -0.01
RPA3P35244 AC015818.8-201ENST00000587907 1519 ntBASIC14.98□□□□□ -0.01
RPA3P35244 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RPA3P35244 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPA3P35244 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.98□□□□□ -0.01
RPA3P35244 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPA3P35244 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPA3P35244 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RPA3P35244 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RPA3P35244 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.98□□□□□ -0.01
RPA3P35244 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RPA3P35244 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.98□□□□□ -0.01
RPA3P35244 CRB3P1-201ENST00000449338 276 ntBASIC14.98□□□□□ -0.01
RPA3P35244 VDAC1P7-201ENST00000462417 847 ntBASIC14.98□□□□□ -0.01
RPA3P35244 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.98□□□□□ -0.01
RPA3P35244 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.98□□□□□ -0.01
RPA3P35244 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.98□□□□□ -0.01
RPA3P35244 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.98□□□□□ -0.01
RPA3P35244 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.98□□□□□ -0.01
RPA3P35244 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.98□□□□□ -0.01
RPA3P35244 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.98□□□□□ -0.01
RPA3P35244 MIR8072-201ENST00000614241 80 ntBASIC14.98□□□□□ -0.01
RPA3P35244 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPA3P35244 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPA3P35244 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPA3P35244 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.98□□□□□ -0.01
RPA3P35244 FAM90A12P-201ENST00000519497 2375 ntBASIC14.98□□□□□ -0.01
RPA3P35244 FAM90A24P-201ENST00000520792 2369 ntBASIC14.98□□□□□ -0.01
RPA3P35244 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.98□□□□□ -0.01
RPA3P35244 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPA3P35244 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.98□□□□□ -0.01
RPA3P35244 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPA3P35244 RN7SL832P-201ENST00000607781 1756 ntBASIC14.98□□□□□ -0.01
RPA3P35244 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RPA3P35244 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RPA3P35244 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPA3P35244 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPA3P35244 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.97□□□□□ -0.01
RPA3P35244 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
RPA3P35244 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.97□□□□□ -0.01
RPA3P35244 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.97□□□□□ -0.01
RPA3P35244 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
RPA3P35244 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RPA3P35244 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RPA3P35244 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.97□□□□□ -0.01
RPA3P35244 GAPDHP40-201ENST00000505218 1006 ntBASIC14.97□□□□□ -0.01
RPA3P35244 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.97□□□□□ -0.01
RPA3P35244 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.97□□□□□ -0.01
RPA3P35244 AC027307.3-201ENST00000594262 1100 ntBASIC14.97□□□□□ -0.01
RPA3P35244 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.97□□□□□ -0.01
RPA3P35244 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RPA3P35244 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.97□□□□□ -0.01
RPA3P35244 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.97□□□□□ -0.01
RPA3P35244 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RPA3P35244 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms