Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.19□□□□□ -0.3
HOXC12P31275 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.19□□□□□ -0.3
HOXC12P31275 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.19□□□□□ -0.3
HOXC12P31275 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.19□□□□□ -0.3
HOXC12P31275 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HOXC12P31275 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.18□□□□□ -0.3
HOXC12P31275 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HOXC12P31275 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.18□□□□□ -0.3
HOXC12P31275 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.18□□□□□ -0.3
HOXC12P31275 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.18□□□□□ -0.3
HOXC12P31275 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.18□□□□□ -0.3
HOXC12P31275 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.18□□□□□ -0.3
HOXC12P31275 MPRIPP1-201ENST00000452433 1089 ntBASIC13.18□□□□□ -0.3
HOXC12P31275 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.18□□□□□ -0.3
HOXC12P31275 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.18□□□□□ -0.3
HOXC12P31275 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.18□□□□□ -0.3
HOXC12P31275 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HOXC12P31275 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.18□□□□□ -0.3
HOXC12P31275 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.18□□□□□ -0.3
HOXC12P31275 MIR4722-201ENST00000578292 60 ntBASIC13.18□□□□□ -0.3
HOXC12P31275 OR10B1P-201ENST00000601666 907 ntBASIC13.18□□□□□ -0.3
HOXC12P31275 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
HOXC12P31275 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.18□□□□□ -0.3
HOXC12P31275 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.18□□□□□ -0.3
HOXC12P31275 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
HOXC12P31275 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.18□□□□□ -0.3
HOXC12P31275 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HOXC12P31275 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HOXC12P31275 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.18□□□□□ -0.3
HOXC12P31275 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HOXC12P31275 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HOXC12P31275 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HOXC12P31275 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.18□□□□□ -0.3
HOXC12P31275 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HOXC12P31275 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HOXC12P31275 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HOXC12P31275 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HOXC12P31275 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.17□□□□□ -0.3
HOXC12P31275 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HOXC12P31275 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
HOXC12P31275 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.17□□□□□ -0.3
HOXC12P31275 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HOXC12P31275 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HOXC12P31275 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.17□□□□□ -0.3
HOXC12P31275 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.17□□□□□ -0.3
HOXC12P31275 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HOXC12P31275 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HOXC12P31275 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HOXC12P31275 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
HOXC12P31275 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HOXC12P31275 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
HOXC12P31275 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.17□□□□□ -0.3
HOXC12P31275 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
HOXC12P31275 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.17□□□□□ -0.3
HOXC12P31275 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.17□□□□□ -0.3
HOXC12P31275 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.17□□□□□ -0.3
HOXC12P31275 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.17□□□□□ -0.3
HOXC12P31275 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.17□□□□□ -0.3
HOXC12P31275 HOMER2P2-201ENST00000451621 847 ntBASIC13.17□□□□□ -0.3
HOXC12P31275 EIF4HP1-201ENST00000453115 687 ntBASIC13.17□□□□□ -0.3
HOXC12P31275 AC026434.2-201ENST00000506094 1078 ntBASIC13.17□□□□□ -0.3
HOXC12P31275 COX5BP1-201ENST00000507622 393 ntBASIC13.17□□□□□ -0.3
HOXC12P31275 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms