Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
HOXC8P31273 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.8■□□□□ 0.12
HOXC8P31273 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXC8P31273 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.8■□□□□ 0.12
HOXC8P31273 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
HOXC8P31273 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXC8P31273 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.79■□□□□ 0.12
HOXC8P31273 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.79■□□□□ 0.12
HOXC8P31273 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HOXC8P31273 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.79■□□□□ 0.12
HOXC8P31273 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.79■□□□□ 0.12
HOXC8P31273 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC8P31273 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.79■□□□□ 0.12
HOXC8P31273 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC8P31273 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC8P31273 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HOXC8P31273 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC8P31273 TEKT4P2-202ENST00000559466 1312 ntBASIC15.79■□□□□ 0.12
HOXC8P31273 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC8P31273 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HOXC8P31273 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.79■□□□□ 0.12
HOXC8P31273 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC8P31273 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
HOXC8P31273 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.79■□□□□ 0.12
HOXC8P31273 KRT18P66-201ENST00000452970 1269 ntBASIC15.79■□□□□ 0.12
HOXC8P31273 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.79■□□□□ 0.12
HOXC8P31273 AC095040.1-201ENST00000513286 675 ntBASIC15.79■□□□□ 0.12
HOXC8P31273 OR5BD1P-201ENST00000532527 817 ntBASIC15.79■□□□□ 0.12
HOXC8P31273 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.79■□□□□ 0.12
HOXC8P31273 HERC2P11-201ENST00000562845 725 ntBASIC15.79■□□□□ 0.12
HOXC8P31273 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.79■□□□□ 0.12
HOXC8P31273 AC100756.2-201ENST00000569537 736 ntBASIC15.79■□□□□ 0.12
HOXC8P31273 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.79■□□□□ 0.12
HOXC8P31273 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.79■□□□□ 0.12
HOXC8P31273 AC138466.5-201ENST00000624002 808 ntBASIC15.79■□□□□ 0.12
HOXC8P31273 AC127024.7-201ENST00000625101 200 ntBASIC15.79■□□□□ 0.12
HOXC8P31273 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.79■□□□□ 0.12
HOXC8P31273 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.79■□□□□ 0.12
HOXC8P31273 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC8P31273 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.79■□□□□ 0.12
HOXC8P31273 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.79■□□□□ 0.12
HOXC8P31273 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HOXC8P31273 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC8P31273 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC8P31273 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC8P31273 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC8P31273 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC8P31273 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC8P31273 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
HOXC8P31273 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.79■□□□□ 0.12
HOXC8P31273 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HOXC8P31273 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 AC008741.2-201ENST00000612792 3115 ntBASIC15.78■□□□□ 0.12
HOXC8P31273 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.78■□□□□ 0.12
HOXC8P31273 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 PYY2-201ENST00000315776 282 ntBASIC15.78■□□□□ 0.12
HOXC8P31273 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 BAK1P1-201ENST00000317045 636 ntBASIC15.78■□□□□ 0.12
HOXC8P31273 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HOXC8P31273 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC15.78■□□□□ 0.12
HOXC8P31273 LINC00265-2P-201ENST00000413372 782 ntBASIC15.78■□□□□ 0.12
HOXC8P31273 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.78■□□□□ 0.12
HOXC8P31273 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.78■□□□□ 0.12
HOXC8P31273 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HOXC8P31273 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.78■□□□□ 0.12
HOXC8P31273 AP003398.1-201ENST00000531124 318 ntBASIC15.78■□□□□ 0.12
HOXC8P31273 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.78■□□□□ 0.12
HOXC8P31273 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HOXC8P31273 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.78■□□□□ 0.12
HOXC8P31273 AP000322.3-201ENST00000608665 388 ntBASIC15.78■□□□□ 0.12
HOXC8P31273 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HOXC8P31273 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HOXC8P31273 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.78■□□□□ 0.12
HOXC8P31273 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.78■□□□□ 0.12
HOXC8P31273 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.78■□□□□ 0.12
HOXC8P31273 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HOXC8P31273 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HOXC8P31273 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HOXC8P31273 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms