Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AL118508.1-201ENST00000613502 2345 ntBASIC16.21■□□□□ 0.19
CTGFP29279 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CTGFP29279 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.21■□□□□ 0.19
CTGFP29279 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTGFP29279 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CTGFP29279 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTGFP29279 CTSL-202ENST00000342020 933 ntTSL 2 BASIC16.21■□□□□ 0.19
CTGFP29279 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CTGFP29279 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CTGFP29279 AC006987.1-201ENST00000413610 527 ntBASIC16.21■□□□□ 0.19
CTGFP29279 AL512599.1-201ENST00000430724 685 ntBASIC16.21■□□□□ 0.19
CTGFP29279 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.21■□□□□ 0.19
CTGFP29279 SEPHS2P1-201ENST00000511618 1162 ntBASIC16.21■□□□□ 0.19
CTGFP29279 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTGFP29279 F11R-204ENST00000537746 1245 ntTSL 2 BASIC16.21■□□□□ 0.19
CTGFP29279 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTGFP29279 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.21■□□□□ 0.19
CTGFP29279 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CTGFP29279 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC16.21■□□□□ 0.19
CTGFP29279 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC16.21■□□□□ 0.19
CTGFP29279 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.21■□□□□ 0.19
CTGFP29279 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTGFP29279 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTGFP29279 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTGFP29279 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTGFP29279 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.21■□□□□ 0.19
CTGFP29279 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTGFP29279 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTGFP29279 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.21■□□□□ 0.19
CTGFP29279 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTGFP29279 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CTGFP29279 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CTGFP29279 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.21■□□□□ 0.18
CTGFP29279 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTGFP29279 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTGFP29279 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTGFP29279 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.21■□□□□ 0.18
CTGFP29279 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTGFP29279 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.2■□□□□ 0.18
CTGFP29279 PDXDC2P-206ENST00000534700 1315 ntBASIC16.2■□□□□ 0.18
CTGFP29279 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CTGFP29279 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTGFP29279 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTGFP29279 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTGFP29279 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.2■□□□□ 0.18
CTGFP29279 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTGFP29279 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTGFP29279 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CTGFP29279 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CTGFP29279 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTGFP29279 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTGFP29279 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.2■□□□□ 0.18
CTGFP29279 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.2■□□□□ 0.18
CTGFP29279 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.2■□□□□ 0.18
CTGFP29279 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CTGFP29279 ASS1P2-201ENST00000439895 1223 ntBASIC16.2■□□□□ 0.18
CTGFP29279 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC16.2■□□□□ 0.18
CTGFP29279 AC025186.1-201ENST00000478174 870 ntBASIC16.2■□□□□ 0.18
CTGFP29279 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.2■□□□□ 0.18
CTGFP29279 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CTGFP29279 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.2■□□□□ 0.18
CTGFP29279 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTGFP29279 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CTGFP29279 AL359091.4-201ENST00000610052 409 ntBASIC16.2■□□□□ 0.18
CTGFP29279 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC16.2■□□□□ 0.18
CTGFP29279 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC16.2■□□□□ 0.18
CTGFP29279 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTGFP29279 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CTGFP29279 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CTGFP29279 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTGFP29279 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CTGFP29279 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CTGFP29279 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTGFP29279 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CTGFP29279 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.2■□□□□ 0.18
CTGFP29279 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.19■□□□□ 0.18
CTGFP29279 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTGFP29279 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTGFP29279 LINC00554-201ENST00000564841 3011 ntBASIC16.19■□□□□ 0.18
CTGFP29279 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTGFP29279 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTGFP29279 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTGFP29279 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.19■□□□□ 0.18
CTGFP29279 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTGFP29279 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTGFP29279 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTGFP29279 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTGFP29279 NHP2P1-201ENST00000335274 462 ntBASIC16.19■□□□□ 0.18
CTGFP29279 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTGFP29279 PIFO-201ENST00000369737 746 ntTSL 2 BASIC16.19■□□□□ 0.18
CTGFP29279 AP000354.1-201ENST00000396982 456 ntBASIC16.19■□□□□ 0.18
CTGFP29279 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC16.19■□□□□ 0.18
CTGFP29279 LINC00265-2P-201ENST00000413372 782 ntBASIC16.19■□□□□ 0.18
CTGFP29279 BX679664.3-201ENST00000414070 555 ntBASIC16.19■□□□□ 0.18
CTGFP29279 PSAT1P2-201ENST00000426107 972 ntBASIC16.19■□□□□ 0.18
CTGFP29279 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.19■□□□□ 0.18
CTGFP29279 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC16.19■□□□□ 0.18
CTGFP29279 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.19■□□□□ 0.18
CTGFP29279 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.19■□□□□ 0.18
CTGFP29279 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms