Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VARSP26640 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.65□□□□□ -0.06
VARSP26640 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
VARSP26640 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
VARSP26640 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
VARSP26640 SBF1P1-201ENST00000444527 5631 ntBASIC14.65□□□□□ -0.06
VARSP26640 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.65□□□□□ -0.06
VARSP26640 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
VARSP26640 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.65□□□□□ -0.06
VARSP26640 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.64□□□□□ -0.07
VARSP26640 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.64□□□□□ -0.07
VARSP26640 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.64□□□□□ -0.07
VARSP26640 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.64□□□□□ -0.07
VARSP26640 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
VARSP26640 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
VARSP26640 KLF2P2-201ENST00000416807 1039 ntBASIC14.64□□□□□ -0.07
VARSP26640 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.64□□□□□ -0.07
VARSP26640 NUS1P3-201ENST00000423502 862 ntBASIC14.64□□□□□ -0.07
VARSP26640 AC245100.3-201ENST00000441281 285 ntBASIC14.64□□□□□ -0.07
VARSP26640 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
VARSP26640 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.64□□□□□ -0.07
VARSP26640 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
VARSP26640 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.64□□□□□ -0.07
VARSP26640 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.64□□□□□ -0.07
VARSP26640 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.64□□□□□ -0.07
VARSP26640 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.64□□□□□ -0.07
VARSP26640 AP001542.1-201ENST00000591314 200 ntBASIC14.64□□□□□ -0.07
VARSP26640 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.64□□□□□ -0.07
VARSP26640 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.64□□□□□ -0.07
VARSP26640 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.64□□□□□ -0.07
VARSP26640 AL033527.4-201ENST00000641026 673 ntBASIC14.64□□□□□ -0.07
VARSP26640 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 AC097359.2-201ENST00000604992 2389 ntBASIC14.64□□□□□ -0.07
VARSP26640 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.64□□□□□ -0.07
VARSP26640 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.64□□□□□ -0.07
VARSP26640 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.64□□□□□ -0.07
VARSP26640 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.64□□□□□ -0.07
VARSP26640 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
VARSP26640 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.64□□□□□ -0.07
VARSP26640 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VARSP26640 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
VARSP26640 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.63□□□□□ -0.07
VARSP26640 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.63□□□□□ -0.07
VARSP26640 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
VARSP26640 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.63□□□□□ -0.07
VARSP26640 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 AL162726.2-201ENST00000438986 1017 ntBASIC14.63□□□□□ -0.07
VARSP26640 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.63□□□□□ -0.07
VARSP26640 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.63□□□□□ -0.07
VARSP26640 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.63□□□□□ -0.07
VARSP26640 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VARSP26640 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.63□□□□□ -0.07
VARSP26640 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.63□□□□□ -0.07
VARSP26640 AP000240.1-201ENST00000609910 452 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms