Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PTX3P26022 MYADML-201ENST00000474610 2147 ntBASIC14.2□□□□□ -0.14
PTX3P26022 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 AL359183.1-201ENST00000623796 2132 ntBASIC14.2□□□□□ -0.14
PTX3P26022 AC015688.4-201ENST00000580780 1647 ntBASIC14.2□□□□□ -0.14
PTX3P26022 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.2□□□□□ -0.14
PTX3P26022 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PTX3P26022 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.2□□□□□ -0.14
PTX3P26022 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.2□□□□□ -0.14
PTX3P26022 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PTX3P26022 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
PTX3P26022 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PTX3P26022 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PTX3P26022 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.2□□□□□ -0.14
PTX3P26022 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.2□□□□□ -0.14
PTX3P26022 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 KRT43P-201ENST00000434019 910 ntBASIC14.2□□□□□ -0.14
PTX3P26022 FAM8A4P-201ENST00000435433 1213 ntBASIC14.2□□□□□ -0.14
PTX3P26022 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.2□□□□□ -0.14
PTX3P26022 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.2□□□□□ -0.14
PTX3P26022 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.2□□□□□ -0.14
PTX3P26022 KRT17P7-201ENST00000451704 1104 ntBASIC14.2□□□□□ -0.14
PTX3P26022 AC007551.1-201ENST00000457394 519 ntBASIC14.2□□□□□ -0.14
PTX3P26022 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
PTX3P26022 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.2□□□□□ -0.14
PTX3P26022 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PTX3P26022 CR383656.12-201ENST00000549567 513 ntBASIC14.2□□□□□ -0.14
PTX3P26022 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.2□□□□□ -0.14
PTX3P26022 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.2□□□□□ -0.14
PTX3P26022 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.2□□□□□ -0.14
PTX3P26022 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.2□□□□□ -0.14
PTX3P26022 IGHV3-72-202ENST00000621503 303 ntBASIC14.2□□□□□ -0.14
PTX3P26022 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.2□□□□□ -0.14
PTX3P26022 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PTX3P26022 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.2□□□□□ -0.14
PTX3P26022 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PTX3P26022 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
PTX3P26022 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.2□□□□□ -0.14
PTX3P26022 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.2□□□□□ -0.14
PTX3P26022 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PTX3P26022 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PTX3P26022 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.2□□□□□ -0.14
PTX3P26022 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.2□□□□□ -0.14
PTX3P26022 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
PTX3P26022 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
PTX3P26022 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTX3P26022 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.19□□□□□ -0.14
PTX3P26022 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.19□□□□□ -0.14
PTX3P26022 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PTX3P26022 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.19□□□□□ -0.14
PTX3P26022 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PTX3P26022 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
PTX3P26022 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.19□□□□□ -0.14
PTX3P26022 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.19□□□□□ -0.14
PTX3P26022 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.19□□□□□ -0.14
PTX3P26022 RN7SKP175-201ENST00000408472 289 ntBASIC14.19□□□□□ -0.14
PTX3P26022 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.19□□□□□ -0.14
PTX3P26022 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 CNN2P8-201ENST00000421872 913 ntBASIC14.19□□□□□ -0.14
PTX3P26022 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PTX3P26022 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.19□□□□□ -0.14
PTX3P26022 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
PTX3P26022 FTH1P14-201ENST00000482930 551 ntBASIC14.19□□□□□ -0.14
PTX3P26022 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTX3P26022 AL391280.1-201ENST00000506969 1062 ntBASIC14.19□□□□□ -0.14
PTX3P26022 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.19□□□□□ -0.14
PTX3P26022 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms