Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.58□□□□□ -0.4
VAMP1P23763 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
VAMP1P23763 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.58□□□□□ -0.4
VAMP1P23763 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.58□□□□□ -0.4
VAMP1P23763 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.58□□□□□ -0.4
VAMP1P23763 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
VAMP1P23763 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 AL591122.2-201ENST00000624125 1853 ntBASIC12.57□□□□□ -0.4
VAMP1P23763 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
VAMP1P23763 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
VAMP1P23763 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
VAMP1P23763 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 MIR346-201ENST00000362234 95 ntBASIC12.57□□□□□ -0.4
VAMP1P23763 AL353705.2-201ENST00000428243 662 ntBASIC12.57□□□□□ -0.4
VAMP1P23763 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.57□□□□□ -0.4
VAMP1P23763 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 FAM210CP-201ENST00000445714 574 ntBASIC12.57□□□□□ -0.4
VAMP1P23763 EMBP1-201ENST00000458200 901 ntBASIC12.57□□□□□ -0.4
VAMP1P23763 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.57□□□□□ -0.4
VAMP1P23763 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.57□□□□□ -0.4
VAMP1P23763 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.57□□□□□ -0.4
VAMP1P23763 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.57□□□□□ -0.4
VAMP1P23763 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.57□□□□□ -0.4
VAMP1P23763 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.57□□□□□ -0.4
VAMP1P23763 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.57□□□□□ -0.4
VAMP1P23763 AC111170.3-201ENST00000624282 2464 ntBASIC12.57□□□□□ -0.4
VAMP1P23763 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
VAMP1P23763 CICP16-201ENST00000502609 2813 ntBASIC12.57□□□□□ -0.4
VAMP1P23763 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.57□□□□□ -0.4
VAMP1P23763 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
VAMP1P23763 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VAMP1P23763 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.57□□□□□ -0.4
VAMP1P23763 AL359649.1-201ENST00000607406 1741 ntBASIC12.57□□□□□ -0.4
VAMP1P23763 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC12.56□□□□□ -0.4
VAMP1P23763 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.56□□□□□ -0.4
VAMP1P23763 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.56□□□□□ -0.4
VAMP1P23763 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
VAMP1P23763 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.56□□□□□ -0.4
VAMP1P23763 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
VAMP1P23763 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VAMP1P23763 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms