Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NCLP19338 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 AC015802.1-201ENST00000588104 1449 ntBASIC17.73■□□□□ 0.43
NCLP19338 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NCLP19338 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.73■□□□□ 0.43
NCLP19338 Z97205.2-201ENST00000564697 1639 ntBASIC17.73■□□□□ 0.43
NCLP19338 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
NCLP19338 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
NCLP19338 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NCLP19338 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.73■□□□□ 0.43
NCLP19338 AL080243.2-201ENST00000418783 582 ntBASIC17.73■□□□□ 0.43
NCLP19338 AC244107.1-201ENST00000442033 332 ntBASIC17.73■□□□□ 0.43
NCLP19338 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.73■□□□□ 0.43
NCLP19338 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.73■□□□□ 0.43
NCLP19338 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 AC190387.1-201ENST00000551683 408 ntBASIC17.73■□□□□ 0.43
NCLP19338 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.73■□□□□ 0.43
NCLP19338 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.73■□□□□ 0.43
NCLP19338 AC025048.3-201ENST00000590609 569 ntBASIC17.73■□□□□ 0.43
NCLP19338 LINC01115-203ENST00000606068 577 ntBASIC17.73■□□□□ 0.43
NCLP19338 AC005702.4-201ENST00000618393 416 ntBASIC17.73■□□□□ 0.43
NCLP19338 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.73■□□□□ 0.43
NCLP19338 AL033527.5-202ENST00000641632 1098 ntBASIC17.73■□□□□ 0.43
NCLP19338 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NCLP19338 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NCLP19338 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.73■□□□□ 0.43
NCLP19338 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC17.73■□□□□ 0.43
NCLP19338 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.73■□□□□ 0.43
NCLP19338 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NCLP19338 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
NCLP19338 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NCLP19338 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCLP19338 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NCLP19338 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NCLP19338 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC17.72■□□□□ 0.43
NCLP19338 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NCLP19338 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NCLP19338 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.72■□□□□ 0.43
NCLP19338 AC015922.1-201ENST00000421102 1152 ntBASIC17.72■□□□□ 0.43
NCLP19338 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.72■□□□□ 0.43
NCLP19338 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NCLP19338 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.72■□□□□ 0.43
NCLP19338 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NCLP19338 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NCLP19338 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 AL121723.1-201ENST00000445194 1519 ntBASIC17.72■□□□□ 0.43
NCLP19338 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.72■□□□□ 0.43
NCLP19338 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.72■□□□□ 0.43
NCLP19338 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCLP19338 AC087499.5-201ENST00000452760 1342 ntBASIC17.72■□□□□ 0.43
NCLP19338 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NCLP19338 AC011474.4-201ENST00000623523 2076 ntBASIC17.71■□□□□ 0.43
NCLP19338 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC17.71■□□□□ 0.43
NCLP19338 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.71■□□□□ 0.43
NCLP19338 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC17.71■□□□□ 0.43
NCLP19338 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NCLP19338 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC17.71■□□□□ 0.43
NCLP19338 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NCLP19338 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.71■□□□□ 0.43
NCLP19338 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NCLP19338 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NCLP19338 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NCLP19338 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
NCLP19338 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NCLP19338 AC009477.1-201ENST00000452936 217 ntBASIC17.71■□□□□ 0.43
NCLP19338 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.71■□□□□ 0.43
NCLP19338 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NCLP19338 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NCLP19338 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NCLP19338 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.71■□□□□ 0.43
NCLP19338 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms