Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.02□□□□□ -0.33
ATF1P18846 AC019294.4-201ENST00000561777 2905 ntBASIC13.02□□□□□ -0.33
ATF1P18846 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ATF1P18846 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATF1P18846 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATF1P18846 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ATF1P18846 NUS1P3-201ENST00000423502 862 ntBASIC13.02□□□□□ -0.33
ATF1P18846 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.02□□□□□ -0.33
ATF1P18846 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.02□□□□□ -0.33
ATF1P18846 AC055876.3-201ENST00000431496 288 ntBASIC13.02□□□□□ -0.33
ATF1P18846 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.02□□□□□ -0.33
ATF1P18846 AC004890.2-204ENST00000481968 304 ntBASIC13.02□□□□□ -0.33
ATF1P18846 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.02□□□□□ -0.33
ATF1P18846 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATF1P18846 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.02□□□□□ -0.33
ATF1P18846 AC138649.4-201ENST00000612222 287 ntBASIC13.02□□□□□ -0.33
ATF1P18846 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ATF1P18846 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATF1P18846 KRT18P28-201ENST00000453838 1332 ntBASIC13.02□□□□□ -0.33
ATF1P18846 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ATF1P18846 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATF1P18846 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATF1P18846 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
ATF1P18846 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATF1P18846 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATF1P18846 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
ATF1P18846 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.02□□□□□ -0.33
ATF1P18846 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATF1P18846 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.02□□□□□ -0.33
ATF1P18846 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATF1P18846 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATF1P18846 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATF1P18846 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATF1P18846 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.01□□□□□ -0.33
ATF1P18846 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ATF1P18846 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.01□□□□□ -0.33
ATF1P18846 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.01□□□□□ -0.33
ATF1P18846 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.01□□□□□ -0.33
ATF1P18846 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.01□□□□□ -0.33
ATF1P18846 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.01□□□□□ -0.33
ATF1P18846 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.01□□□□□ -0.33
ATF1P18846 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.01□□□□□ -0.33
ATF1P18846 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.01□□□□□ -0.33
ATF1P18846 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.01□□□□□ -0.33
ATF1P18846 METTL21AP1-201ENST00000438852 635 ntBASIC13.01□□□□□ -0.33
ATF1P18846 VDAC1P7-201ENST00000462417 847 ntBASIC13.01□□□□□ -0.33
ATF1P18846 RN7SL399P-201ENST00000471648 279 ntBASIC13.01□□□□□ -0.33
ATF1P18846 RPL13AP25-201ENST00000484130 612 ntBASIC13.01□□□□□ -0.33
ATF1P18846 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.01□□□□□ -0.33
ATF1P18846 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.01□□□□□ -0.33
ATF1P18846 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
ATF1P18846 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.01□□□□□ -0.33
ATF1P18846 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.01□□□□□ -0.33
ATF1P18846 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
ATF1P18846 AC093813.1-201ENST00000605066 256 ntBASIC13.01□□□□□ -0.33
ATF1P18846 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.01□□□□□ -0.33
ATF1P18846 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ATF1P18846 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.01□□□□□ -0.33
ATF1P18846 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.01□□□□□ -0.33
ATF1P18846 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.01□□□□□ -0.33
ATF1P18846 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.01□□□□□ -0.33
ATF1P18846 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.01□□□□□ -0.33
ATF1P18846 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.01□□□□□ -0.33
ATF1P18846 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ATF1P18846 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.01□□□□□ -0.33
ATF1P18846 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.01□□□□□ -0.33
ATF1P18846 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATF1P18846 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms