Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCANP13611 AC144831.1-201ENST00000573312 2656 ntBASIC14.81□□□□□ -0.04
VCANP13611 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCANP13611 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCANP13611 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VCANP13611 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.81□□□□□ -0.04
VCANP13611 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.81□□□□□ -0.04
VCANP13611 OR7E12P-201ENST00000344740 973 ntBASIC14.81□□□□□ -0.04
VCANP13611 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
VCANP13611 ALDOAP1-201ENST00000491506 1078 ntBASIC14.81□□□□□ -0.04
VCANP13611 AC095040.1-201ENST00000513286 675 ntBASIC14.81□□□□□ -0.04
VCANP13611 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VCANP13611 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC14.81□□□□□ -0.04
VCANP13611 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VCANP13611 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.81□□□□□ -0.04
VCANP13611 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC14.81□□□□□ -0.04
VCANP13611 FAM226B-201ENST00000602508 1490 ntBASIC14.81□□□□□ -0.04
VCANP13611 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC14.81□□□□□ -0.04
VCANP13611 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.81□□□□□ -0.04
VCANP13611 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCANP13611 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VCANP13611 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
VCANP13611 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
VCANP13611 AC091951.1-201ENST00000512854 2465 ntBASIC14.81□□□□□ -0.04
VCANP13611 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCANP13611 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.81□□□□□ -0.04
VCANP13611 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCANP13611 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VCANP13611 PPP1R2P4-201ENST00000424051 595 ntBASIC14.81□□□□□ -0.04
VCANP13611 CRIP1P2-201ENST00000425396 228 ntBASIC14.81□□□□□ -0.04
VCANP13611 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC14.81□□□□□ -0.04
VCANP13611 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.81□□□□□ -0.04
VCANP13611 AP003170.2-201ENST00000544730 786 ntBASIC14.81□□□□□ -0.04
VCANP13611 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.81□□□□□ -0.04
VCANP13611 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC14.81□□□□□ -0.04
VCANP13611 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC14.81□□□□□ -0.04
VCANP13611 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCANP13611 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.81□□□□□ -0.04
VCANP13611 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.81□□□□□ -0.04
VCANP13611 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.81□□□□□ -0.04
VCANP13611 TPT1P9-201ENST00000413759 514 ntBASIC14.81□□□□□ -0.04
VCANP13611 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.81□□□□□ -0.04
VCANP13611 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.81□□□□□ -0.04
VCANP13611 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.81□□□□□ -0.04
VCANP13611 HNRNPA1P10-201ENST00000444945 962 ntBASIC14.81□□□□□ -0.04
VCANP13611 UGT1A12P-201ENST00000447084 853 ntBASIC14.81□□□□□ -0.04
VCANP13611 AC007679.1-201ENST00000458609 502 ntBASIC14.81□□□□□ -0.04
VCANP13611 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCANP13611 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC14.81□□□□□ -0.04
VCANP13611 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VCANP13611 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.8□□□□□ -0.04
VCANP13611 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VCANP13611 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 HNRNPA1P21-201ENST00000424115 961 ntBASIC14.8□□□□□ -0.04
VCANP13611 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC14.8□□□□□ -0.04
VCANP13611 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 AC004801.1-201ENST00000549557 360 ntBASIC14.8□□□□□ -0.04
VCANP13611 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC14.8□□□□□ -0.04
VCANP13611 PSME3-213ENST00000592169 826 ntTSL 3 BASIC14.8□□□□□ -0.04
VCANP13611 AC113385.2-201ENST00000614465 762 ntBASIC14.8□□□□□ -0.04
VCANP13611 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.8□□□□□ -0.04
VCANP13611 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.8□□□□□ -0.04
VCANP13611 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.8□□□□□ -0.04
VCANP13611 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
VCANP13611 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.8□□□□□ -0.04
VCANP13611 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VCANP13611 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.8□□□□□ -0.04
VCANP13611 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 FTH1P18-201ENST00000412071 549 ntBASIC14.8□□□□□ -0.04
VCANP13611 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC14.8□□□□□ -0.04
VCANP13611 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
VCANP13611 ABCD1P3-201ENST00000562927 605 ntBASIC14.8□□□□□ -0.04
VCANP13611 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC14.8□□□□□ -0.04
VCANP13611 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.8□□□□□ -0.04
VCANP13611 AC127002.1-201ENST00000619123 455 ntBASIC14.8□□□□□ -0.04
VCANP13611 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.8□□□□□ -0.04
VCANP13611 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.8□□□□□ -0.04
VCANP13611 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
VCANP13611 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
VCANP13611 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCANP13611 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms