Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL2P13500 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL2P13500 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL2P13500 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.92□□□□□ -0.34
CCL2P13500 AP000593.2-201ENST00000542775 1433 ntBASIC12.92□□□□□ -0.34
CCL2P13500 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.92□□□□□ -0.34
CCL2P13500 AC023310.1-201ENST00000554836 735 ntBASIC12.92□□□□□ -0.34
CCL2P13500 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.92□□□□□ -0.34
CCL2P13500 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CCL2P13500 MIR4741-201ENST00000579822 90 ntBASIC12.92□□□□□ -0.34
CCL2P13500 RN7SL713P-201ENST00000582127 302 ntBASIC12.92□□□□□ -0.34
CCL2P13500 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.92□□□□□ -0.34
CCL2P13500 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.92□□□□□ -0.34
CCL2P13500 AL008721.1-201ENST00000609964 604 ntBASIC12.92□□□□□ -0.34
CCL2P13500 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
CCL2P13500 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CCL2P13500 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 AC005912.2-201ENST00000619492 2400 ntBASIC12.92□□□□□ -0.34
CCL2P13500 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.92□□□□□ -0.34
CCL2P13500 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL2P13500 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.92□□□□□ -0.34
CCL2P13500 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL2P13500 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
CCL2P13500 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CCL2P13500 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 AL354702.1-201ENST00000442006 1960 ntBASIC12.91□□□□□ -0.34
CCL2P13500 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.91□□□□□ -0.34
CCL2P13500 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 AC092135.3-201ENST00000624151 1846 ntBASIC12.91□□□□□ -0.34
CCL2P13500 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.91□□□□□ -0.34
CCL2P13500 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.91□□□□□ -0.34
CCL2P13500 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.91□□□□□ -0.34
CCL2P13500 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CCL2P13500 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.91□□□□□ -0.34
CCL2P13500 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.91□□□□□ -0.34
CCL2P13500 AC004945.1-201ENST00000416738 983 ntBASIC12.91□□□□□ -0.34
CCL2P13500 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.91□□□□□ -0.34
CCL2P13500 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.91□□□□□ -0.34
CCL2P13500 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.91□□□□□ -0.34
CCL2P13500 AC079316.1-201ENST00000548397 411 ntBASIC12.91□□□□□ -0.34
CCL2P13500 PPY2P-201ENST00000582808 702 ntBASIC12.91□□□□□ -0.34
CCL2P13500 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 AC008687.7-202ENST00000637404 953 ntBASIC12.91□□□□□ -0.34
CCL2P13500 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.91□□□□□ -0.34
CCL2P13500 AL009178.2-201ENST00000597278 2719 ntBASIC12.91□□□□□ -0.34
CCL2P13500 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CCL2P13500 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
CCL2P13500 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.91□□□□□ -0.34
CCL2P13500 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL2P13500 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL2P13500 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL2P13500 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL2P13500 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CCL2P13500 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL2P13500 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL2P13500 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.9□□□□□ -0.34
CCL2P13500 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.9□□□□□ -0.34
CCL2P13500 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL2P13500 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL2P13500 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms