Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC11.58□□□□□ -0.56
CD28P10747 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CD28P10747 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.58□□□□□ -0.56
CD28P10747 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.58□□□□□ -0.56
CD28P10747 AC112693.3-201ENST00000624819 1983 ntBASIC11.58□□□□□ -0.56
CD28P10747 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.57□□□□□ -0.56
CD28P10747 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC11.57□□□□□ -0.56
CD28P10747 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC11.57□□□□□ -0.56
CD28P10747 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CD28P10747 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.57□□□□□ -0.56
CD28P10747 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.57□□□□□ -0.56
CD28P10747 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC11.57□□□□□ -0.56
CD28P10747 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CD28P10747 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.57□□□□□ -0.56
CD28P10747 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC11.57□□□□□ -0.56
CD28P10747 ELK2AP-201ENST00000392510 1007 ntBASIC11.57□□□□□ -0.56
CD28P10747 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC11.57□□□□□ -0.56
CD28P10747 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC11.57□□□□□ -0.56
CD28P10747 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC11.57□□□□□ -0.56
CD28P10747 MSRA-203ENST00000441698 788 ntTSL 2 BASIC11.57□□□□□ -0.56
CD28P10747 AC012618.1-201ENST00000461223 412 ntBASIC11.57□□□□□ -0.56
CD28P10747 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC11.57□□□□□ -0.56
CD28P10747 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC11.57□□□□□ -0.56
CD28P10747 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC11.57□□□□□ -0.56
CD28P10747 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC11.57□□□□□ -0.56
CD28P10747 RN7SL190P-201ENST00000582519 257 ntBASIC11.57□□□□□ -0.56
CD28P10747 AC005324.6-201ENST00000587972 613 ntBASIC11.57□□□□□ -0.56
CD28P10747 AC008805.1-201ENST00000590892 364 ntBASIC11.57□□□□□ -0.56
CD28P10747 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 HCG18-245ENST00000602550 559 ntTSL 4 BASIC11.57□□□□□ -0.56
CD28P10747 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC11.57□□□□□ -0.56
CD28P10747 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CD28P10747 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC11.57□□□□□ -0.56
CD28P10747 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.57□□□□□ -0.56
CD28P10747 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC11.57□□□□□ -0.56
CD28P10747 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.57□□□□□ -0.56
CD28P10747 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.57□□□□□ -0.56
CD28P10747 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC11.57□□□□□ -0.56
CD28P10747 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.57□□□□□ -0.56
CD28P10747 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD28P10747 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC11.57□□□□□ -0.56
CD28P10747 AC099063.4-201ENST00000641099 1602 ntBASIC11.57□□□□□ -0.56
CD28P10747 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD28P10747 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD28P10747 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CD28P10747 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CD28P10747 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CD28P10747 REXO1L2P-201ENST00000425429 2069 ntBASIC11.56□□□□□ -0.56
CD28P10747 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD28P10747 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD28P10747 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD28P10747 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CD28P10747 AC006058.4-201ENST00000624016 1670 ntBASIC11.56□□□□□ -0.56
CD28P10747 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CD28P10747 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD28P10747 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD28P10747 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD28P10747 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC11.56□□□□□ -0.56
CD28P10747 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD28P10747 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD28P10747 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD28P10747 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms