Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.22□□□□□ -0.13
SP9P0CG40 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SP9P0CG40 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SP9P0CG40 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SP9P0CG40 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SP9P0CG40 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SP9P0CG40 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SP9P0CG40 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.21□□□□□ -0.13
SP9P0CG40 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.21□□□□□ -0.13
SP9P0CG40 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SP9P0CG40 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SP9P0CG40 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.21□□□□□ -0.13
SP9P0CG40 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.21□□□□□ -0.13
SP9P0CG40 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 AL365181.1-201ENST00000564032 1828 ntBASIC14.21□□□□□ -0.13
SP9P0CG40 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.21□□□□□ -0.13
SP9P0CG40 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC14.21□□□□□ -0.13
SP9P0CG40 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 CDCA4P4-201ENST00000435216 680 ntBASIC14.21□□□□□ -0.13
SP9P0CG40 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 RN7SL128P-201ENST00000467883 305 ntBASIC14.21□□□□□ -0.13
SP9P0CG40 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SP9P0CG40 RPS18P9-201ENST00000482817 460 ntBASIC14.21□□□□□ -0.13
SP9P0CG40 HNRNPA1P56-201ENST00000505767 954 ntBASIC14.21□□□□□ -0.13
SP9P0CG40 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.21□□□□□ -0.13
SP9P0CG40 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.21□□□□□ -0.13
SP9P0CG40 MIR4254-201ENST00000581063 76 ntBASIC14.21□□□□□ -0.13
SP9P0CG40 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC14.21□□□□□ -0.13
SP9P0CG40 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.21□□□□□ -0.13
SP9P0CG40 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC14.21□□□□□ -0.13
SP9P0CG40 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC14.21□□□□□ -0.13
SP9P0CG40 AC139713.2-207ENST00000641556 1292 ntBASIC14.21□□□□□ -0.13
SP9P0CG40 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.21□□□□□ -0.13
SP9P0CG40 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC14.21□□□□□ -0.13
SP9P0CG40 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC14.21□□□□□ -0.13
SP9P0CG40 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
SP9P0CG40 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.21□□□□□ -0.13
SP9P0CG40 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SP9P0CG40 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.14
SP9P0CG40 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.21□□□□□ -0.14
SP9P0CG40 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.21□□□□□ -0.14
SP9P0CG40 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SP9P0CG40 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
SP9P0CG40 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SP9P0CG40 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SP9P0CG40 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SP9P0CG40 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SP9P0CG40 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SP9P0CG40 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SP9P0CG40 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.21□□□□□ -0.14
SP9P0CG40 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SP9P0CG40 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SP9P0CG40 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SP9P0CG40 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SP9P0CG40 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
SP9P0CG40 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SP9P0CG40 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.2□□□□□ -0.14
SP9P0CG40 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SP9P0CG40 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SP9P0CG40 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SP9P0CG40 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
SP9P0CG40 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.2□□□□□ -0.14
SP9P0CG40 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.2□□□□□ -0.14
SP9P0CG40 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SP9P0CG40 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SP9P0CG40 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SP9P0CG40 SOD2-205ENST00000444946 917 ntTSL 2 BASIC14.2□□□□□ -0.14
SP9P0CG40 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.2□□□□□ -0.14
SP9P0CG40 AC092903.1-201ENST00000466506 262 ntBASIC14.2□□□□□ -0.14
SP9P0CG40 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.2□□□□□ -0.14
SP9P0CG40 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC14.2□□□□□ -0.14
SP9P0CG40 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.2□□□□□ -0.14
SP9P0CG40 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SP9P0CG40 AL132994.1-201ENST00000554098 400 ntBASIC14.2□□□□□ -0.14
SP9P0CG40 RN7SL602P-201ENST00000578326 324 ntBASIC14.2□□□□□ -0.14
SP9P0CG40 RN7SL718P-201ENST00000581254 303 ntBASIC14.2□□□□□ -0.14
SP9P0CG40 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC14.2□□□□□ -0.14
SP9P0CG40 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC14.2□□□□□ -0.14
SP9P0CG40 AL353622.2-201ENST00000605846 425 ntBASIC14.2□□□□□ -0.14
SP9P0CG40 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.2□□□□□ -0.14
SP9P0CG40 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.2□□□□□ -0.14
SP9P0CG40 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SP9P0CG40 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SP9P0CG40 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms