Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
HTR1AP08908 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.51□□□□□ -0.25
HTR1AP08908 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
HTR1AP08908 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 AC015922.1-201ENST00000421102 1152 ntBASIC13.51□□□□□ -0.25
HTR1AP08908 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.51□□□□□ -0.25
HTR1AP08908 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.51□□□□□ -0.25
HTR1AP08908 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.51□□□□□ -0.25
HTR1AP08908 KRT18P58-201ENST00000527480 1120 ntBASIC13.51□□□□□ -0.25
HTR1AP08908 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.51□□□□□ -0.25
HTR1AP08908 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.51□□□□□ -0.25
HTR1AP08908 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.51□□□□□ -0.25
HTR1AP08908 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
HTR1AP08908 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.51□□□□□ -0.25
HTR1AP08908 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.51□□□□□ -0.25
HTR1AP08908 AL589739.1-201ENST00000607720 493 ntBASIC13.51□□□□□ -0.25
HTR1AP08908 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
HTR1AP08908 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HTR1AP08908 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HTR1AP08908 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.51□□□□□ -0.25
HTR1AP08908 AGAP12P-201ENST00000585227 2359 ntBASIC13.51□□□□□ -0.25
HTR1AP08908 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
HTR1AP08908 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 AL031595.1-201ENST00000623969 4709 ntBASIC13.51□□□□□ -0.25
HTR1AP08908 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HTR1AP08908 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.5□□□□□ -0.25
HTR1AP08908 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.5□□□□□ -0.25
HTR1AP08908 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.5□□□□□ -0.25
HTR1AP08908 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 CETN4P-206ENST00000642099 2168 ntBASIC13.5□□□□□ -0.25
HTR1AP08908 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.5□□□□□ -0.25
HTR1AP08908 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HTR1AP08908 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
HTR1AP08908 SPDYE14P-201ENST00000442619 822 ntBASIC13.5□□□□□ -0.25
HTR1AP08908 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.5□□□□□ -0.25
HTR1AP08908 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.5□□□□□ -0.25
HTR1AP08908 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.5□□□□□ -0.25
HTR1AP08908 KRT18P43-201ENST00000469825 1281 ntBASIC13.5□□□□□ -0.25
HTR1AP08908 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.5□□□□□ -0.25
HTR1AP08908 AC026150.2-201ENST00000564693 1156 ntBASIC13.5□□□□□ -0.25
HTR1AP08908 AC005829.1-201ENST00000570002 483 ntBASIC13.5□□□□□ -0.25
HTR1AP08908 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.5□□□□□ -0.25
HTR1AP08908 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HTR1AP08908 LINC00628-201ENST00000628516 1289 ntBASIC13.5□□□□□ -0.25
HTR1AP08908 AL513210.1-201ENST00000629608 234 ntBASIC13.5□□□□□ -0.25
HTR1AP08908 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.5□□□□□ -0.25
HTR1AP08908 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms