Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.44■□□□□ 0.06
RB1P06400 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RB1P06400 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RB1P06400 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
RB1P06400 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.44■□□□□ 0.06
RB1P06400 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RB1P06400 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
RB1P06400 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.43■□□□□ 0.06
RB1P06400 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.43■□□□□ 0.06
RB1P06400 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RB1P06400 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.43■□□□□ 0.06
RB1P06400 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RB1P06400 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RB1P06400 MIR645-201ENST00000385283 94 ntBASIC15.43■□□□□ 0.06
RB1P06400 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 RN7SKP109-201ENST00000410592 316 ntBASIC15.43■□□□□ 0.06
RB1P06400 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.43■□□□□ 0.06
RB1P06400 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.43■□□□□ 0.06
RB1P06400 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 RN7SL277P-201ENST00000481521 288 ntBASIC15.43■□□□□ 0.06
RB1P06400 DNM1P51-201ENST00000558149 522 ntBASIC15.43■□□□□ 0.06
RB1P06400 SIGLEC22P-201ENST00000599104 714 ntBASIC15.43■□□□□ 0.06
RB1P06400 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.43■□□□□ 0.06
RB1P06400 ETV2-207ENST00000619399 994 ntTSL 5 BASIC15.43■□□□□ 0.06
RB1P06400 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RB1P06400 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.43■□□□□ 0.06
RB1P06400 AC023024.2-201ENST00000623561 1993 ntBASIC15.43■□□□□ 0.06
RB1P06400 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.43■□□□□ 0.06
RB1P06400 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.43■□□□□ 0.06
RB1P06400 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.43■□□□□ 0.06
RB1P06400 AC046158.3-201ENST00000624947 2558 ntBASIC15.42■□□□□ 0.06
RB1P06400 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.42■□□□□ 0.06
RB1P06400 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RB1P06400 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.42■□□□□ 0.06
RB1P06400 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RB1P06400 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.42■□□□□ 0.06
RB1P06400 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.42■□□□□ 0.06
RB1P06400 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.42■□□□□ 0.06
RB1P06400 AQP7P5-201ENST00000428759 1049 ntBASIC15.42■□□□□ 0.06
RB1P06400 AC098934.1-203ENST00000442868 1262 ntBASIC15.42■□□□□ 0.06
RB1P06400 AQP7P4-201ENST00000447083 1042 ntBASIC15.42■□□□□ 0.06
RB1P06400 AQP7P2-201ENST00000453967 1041 ntBASIC15.42■□□□□ 0.06
RB1P06400 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC15.42■□□□□ 0.06
RB1P06400 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 AC140658.4-201ENST00000561990 352 ntBASIC15.42■□□□□ 0.06
RB1P06400 RN7SL357P-201ENST00000581065 298 ntBASIC15.42■□□□□ 0.06
RB1P06400 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.42■□□□□ 0.06
RB1P06400 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.42■□□□□ 0.06
RB1P06400 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC15.42■□□□□ 0.06
RB1P06400 AQP7P3-201ENST00000624547 1041 ntBASIC15.42■□□□□ 0.06
RB1P06400 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.42■□□□□ 0.06
RB1P06400 AC021305.1-201ENST00000520656 1514 ntBASIC15.42■□□□□ 0.06
RB1P06400 AC006372.4-201ENST00000624122 1543 ntBASIC15.42■□□□□ 0.06
RB1P06400 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RB1P06400 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.42■□□□□ 0.06
RB1P06400 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.42■□□□□ 0.06
RB1P06400 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.42■□□□□ 0.06
RB1P06400 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms