Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 DUX4L45-201ENST00000566406 1057 ntBASIC14.95□□□□□ -0.02
HLA-DQB2P05538 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 AC008825.2-201ENST00000603374 718 ntBASIC14.95□□□□□ -0.02
HLA-DQB2P05538 AC009542.2-202ENST00000619004 1067 ntBASIC14.95□□□□□ -0.02
HLA-DQB2P05538 AC027601.3-201ENST00000622907 509 ntBASIC14.95□□□□□ -0.02
HLA-DQB2P05538 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 HSPA7-201ENST00000445535 1927 ntBASIC14.95□□□□□ -0.02
HLA-DQB2P05538 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 MIR4783-201ENST00000580343 82 ntBASIC14.94□□□□□ -0.02
HLA-DQB2P05538 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
HLA-DQB2P05538 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 SORD2P-201ENST00000558556 1069 ntBASIC14.93□□□□□ -0.02
HLA-DQB2P05538 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 EEF1DP1-201ENST00000585891 896 ntBASIC14.93□□□□□ -0.02
HLA-DQB2P05538 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 AC132192.2-201ENST00000596206 1147 ntBASIC14.93□□□□□ -0.02
HLA-DQB2P05538 MIR6074-201ENST00000612054 107 ntBASIC14.93□□□□□ -0.02
HLA-DQB2P05538 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms