Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 SLC7A15P-201ENST00000424028 1363 ntBASIC13.35□□□□□ -0.27
HLA-DQA2P01906 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 RNU1-114P-201ENST00000365297 166 ntBASIC13.35□□□□□ -0.27
HLA-DQA2P01906 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 AC114812.1-204ENST00000449669 728 ntBASIC13.35□□□□□ -0.27
HLA-DQA2P01906 TPT1P11-201ENST00000458482 498 ntBASIC13.35□□□□□ -0.27
HLA-DQA2P01906 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 RFPL4AP1-201ENST00000530883 850 ntBASIC13.35□□□□□ -0.27
HLA-DQA2P01906 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 AC006538.3-201ENST00000612495 578 ntBASIC13.35□□□□□ -0.27
HLA-DQA2P01906 MIR8072-201ENST00000614241 80 ntBASIC13.35□□□□□ -0.27
HLA-DQA2P01906 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 AC015802.1-201ENST00000588104 1449 ntBASIC13.35□□□□□ -0.27
HLA-DQA2P01906 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA2P01906 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 AL354702.1-201ENST00000442006 1960 ntBASIC13.34□□□□□ -0.27
HLA-DQA2P01906 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms