Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CLDN11O75508 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN11O75508 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN11O75508 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CLDN11O75508 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLDN11O75508 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CLDN11O75508 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.03■□□□□ -0
CLDN11O75508 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.03■□□□□ -0
CLDN11O75508 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN11O75508 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.03■□□□□ -0
CLDN11O75508 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN11O75508 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN11O75508 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN11O75508 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CLDN11O75508 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLDN11O75508 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CLDN11O75508 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.02■□□□□ -0
CLDN11O75508 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 INTS4P1-203ENST00000641008 3683 ntBASIC15.02■□□□□ -0
CLDN11O75508 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.02■□□□□ -0
CLDN11O75508 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.02■□□□□ -0
CLDN11O75508 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CLDN11O75508 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.02■□□□□ -0
CLDN11O75508 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.02■□□□□ -0
CLDN11O75508 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.02■□□□□ -0
CLDN11O75508 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.02■□□□□ -0
CLDN11O75508 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.02■□□□□ -0
CLDN11O75508 AC006122.1-201ENST00000493323 440 ntBASIC15.02■□□□□ -0
CLDN11O75508 SCARNA20.5-201ENST00000516991 142 ntBASIC15.02■□□□□ -0
CLDN11O75508 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.02■□□□□ -0
CLDN11O75508 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.02■□□□□ -0
CLDN11O75508 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.02■□□□□ -0
CLDN11O75508 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.02■□□□□ -0
CLDN11O75508 AC103810.3-201ENST00000583567 96 ntBASIC15.02■□□□□ -0
CLDN11O75508 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN11O75508 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.02■□□□□ -0
CLDN11O75508 MIR6074-201ENST00000612054 107 ntBASIC15.02■□□□□ -0
CLDN11O75508 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.02■□□□□ -0
CLDN11O75508 AC133540.1-201ENST00000620845 1019 ntBASIC15.02■□□□□ -0
CLDN11O75508 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
CLDN11O75508 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CLDN11O75508 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CLDN11O75508 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN11O75508 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN11O75508 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN11O75508 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN11O75508 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.02□□□□□ -0.01
CLDN11O75508 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN11O75508 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLDN11O75508 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN11O75508 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN11O75508 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN11O75508 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CLDN11O75508 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CLDN11O75508 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN11O75508 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN11O75508 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN11O75508 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN11O75508 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN11O75508 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN11O75508 FAM90A7P-201ENST00000382628 1395 ntBASIC15.01□□□□□ -0.01
CLDN11O75508 FAM90A23P-201ENST00000400136 1395 ntBASIC15.01□□□□□ -0.01
CLDN11O75508 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CLDN11O75508 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN11O75508 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN11O75508 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN11O75508 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN11O75508 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLDN11O75508 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN11O75508 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLDN11O75508 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN11O75508 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN11O75508 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN11O75508 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN11O75508 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN11O75508 EIF4HP1-201ENST00000453115 687 ntBASIC15.01□□□□□ -0.01
CLDN11O75508 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.01□□□□□ -0.01
CLDN11O75508 AKR7A2P1-201ENST00000460134 915 ntBASIC15.01□□□□□ -0.01
CLDN11O75508 MARK2P5-201ENST00000507649 634 ntBASIC15.01□□□□□ -0.01
CLDN11O75508 SCARNA21-201ENST00000517026 139 ntBASIC15.01□□□□□ -0.01
CLDN11O75508 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN11O75508 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.01□□□□□ -0.01
CLDN11O75508 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN11O75508 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms