Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.66■□□□□ 0.1
HOXA2O43364 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXA2O43364 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXA2O43364 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXA2O43364 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.66■□□□□ 0.1
HOXA2O43364 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.66■□□□□ 0.1
HOXA2O43364 KRT8P1-201ENST00000557533 1207 ntBASIC15.66■□□□□ 0.1
HOXA2O43364 AC140658.4-201ENST00000561990 352 ntBASIC15.66■□□□□ 0.1
HOXA2O43364 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXA2O43364 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.66■□□□□ 0.1
HOXA2O43364 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXA2O43364 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXA2O43364 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXA2O43364 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
HOXA2O43364 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXA2O43364 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXA2O43364 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXA2O43364 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HOXA2O43364 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.66■□□□□ 0.1
HOXA2O43364 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXA2O43364 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HOXA2O43364 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 MIR600HG-201ENST00000449175 5984 ntBASIC15.66■□□□□ 0.1
HOXA2O43364 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HOXA2O43364 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HOXA2O43364 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXA2O43364 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXA2O43364 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXA2O43364 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXA2O43364 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXA2O43364 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXA2O43364 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXA2O43364 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXA2O43364 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXA2O43364 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXA2O43364 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXA2O43364 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXA2O43364 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXA2O43364 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXA2O43364 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXA2O43364 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXA2O43364 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXA2O43364 RN7SL818P-201ENST00000485099 259 ntBASIC15.65■□□□□ 0.1
HOXA2O43364 NDUFS6P1-201ENST00000485187 316 ntBASIC15.65■□□□□ 0.1
HOXA2O43364 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.65■□□□□ 0.1
HOXA2O43364 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXA2O43364 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
HOXA2O43364 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.65■□□□□ 0.1
HOXA2O43364 MIR4522-201ENST00000584932 87 ntBASIC15.65■□□□□ 0.1
HOXA2O43364 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXA2O43364 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.65■□□□□ 0.1
HOXA2O43364 RN7SL725P-201ENST00000606439 259 ntBASIC15.65■□□□□ 0.1
HOXA2O43364 AC021016.3-201ENST00000608367 477 ntBASIC15.65■□□□□ 0.1
HOXA2O43364 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXA2O43364 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.65■□□□□ 0.1
HOXA2O43364 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXA2O43364 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
HOXA2O43364 AL109954.1-202ENST00000564051 2148 ntBASIC15.65■□□□□ 0.1
HOXA2O43364 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HOXA2O43364 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
HOXA2O43364 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXA2O43364 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXA2O43364 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXA2O43364 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.65■□□□□ 0.1
HOXA2O43364 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXA2O43364 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HOXA2O43364 AC007950.2-201ENST00000615045 2347 ntBASIC15.65■□□□□ 0.1
HOXA2O43364 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXA2O43364 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXA2O43364 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXA2O43364 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXA2O43364 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXA2O43364 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXA2O43364 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.64■□□□□ 0.09
HOXA2O43364 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.64■□□□□ 0.09
HOXA2O43364 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXA2O43364 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXA2O43364 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXA2O43364 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXA2O43364 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXA2O43364 KRT17P5-201ENST00000332088 839 ntBASIC15.64■□□□□ 0.09
HOXA2O43364 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
HOXA2O43364 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXA2O43364 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXA2O43364 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXA2O43364 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXA2O43364 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.64■□□□□ 0.09
HOXA2O43364 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXA2O43364 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXA2O43364 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXA2O43364 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.64■□□□□ 0.09
HOXA2O43364 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms