Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SLC28A1O00337 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.26□□□□□ -0.13
SLC28A1O00337 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SLC28A1O00337 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.26□□□□□ -0.13
SLC28A1O00337 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.26□□□□□ -0.13
SLC28A1O00337 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.26□□□□□ -0.13
SLC28A1O00337 FAM207CP-201ENST00000443486 507 ntBASIC14.26□□□□□ -0.13
SLC28A1O00337 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 AC092183.1-201ENST00000469884 875 ntBASIC14.26□□□□□ -0.13
SLC28A1O00337 AC103988.2-201ENST00000561804 725 ntBASIC14.26□□□□□ -0.13
SLC28A1O00337 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.26□□□□□ -0.13
SLC28A1O00337 AC138696.2-201ENST00000607376 223 ntBASIC14.26□□□□□ -0.13
SLC28A1O00337 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.26□□□□□ -0.13
SLC28A1O00337 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SLC28A1O00337 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC28A1O00337 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SLC28A1O00337 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A1O00337 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SLC28A1O00337 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.25□□□□□ -0.13
SLC28A1O00337 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SLC28A1O00337 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SLC28A1O00337 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 API5-211ENST00000534695 560 ntTSL 5 BASIC14.25□□□□□ -0.13
SLC28A1O00337 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
SLC28A1O00337 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.25□□□□□ -0.13
SLC28A1O00337 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.25□□□□□ -0.13
SLC28A1O00337 CTBP2P3-201ENST00000585629 1255 ntBASIC14.25□□□□□ -0.13
SLC28A1O00337 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.25□□□□□ -0.13
SLC28A1O00337 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SLC28A1O00337 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
SLC28A1O00337 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.25□□□□□ -0.13
SLC28A1O00337 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 AC010327.5-201ENST00000586923 3061 ntBASIC14.25□□□□□ -0.13
SLC28A1O00337 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SLC28A1O00337 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC28A1O00337 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC28A1O00337 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC28A1O00337 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC28A1O00337 CLUHP2-201ENST00000426660 1303 ntBASIC14.24□□□□□ -0.13
SLC28A1O00337 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SLC28A1O00337 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 MIR770-201ENST00000390219 98 ntBASIC14.24□□□□□ -0.13
SLC28A1O00337 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC28A1O00337 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC28A1O00337 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.24□□□□□ -0.13
SLC28A1O00337 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC28A1O00337 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.24□□□□□ -0.13
SLC28A1O00337 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.24□□□□□ -0.13
SLC28A1O00337 AC008494.3-201ENST00000606615 944 ntBASIC14.24□□□□□ -0.13
SLC28A1O00337 BX088702.1-201ENST00000610784 235 ntBASIC14.24□□□□□ -0.13
SLC28A1O00337 GPALPP1-207ENST00000611650 899 ntBASIC14.24□□□□□ -0.13
SLC28A1O00337 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SLC28A1O00337 WFDC1-204ENST00000613603 549 ntBASIC14.24□□□□□ -0.13
SLC28A1O00337 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms