Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCDC188H7C350 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC188H7C350 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC188H7C350 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC188H7C350 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCDC188H7C350 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CCDC188H7C350 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC188H7C350 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC188H7C350 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC188H7C350 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.38■□□□□ 0.05
CCDC188H7C350 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 EIF3FP3-201ENST00000434851 1086 ntBASIC15.38■□□□□ 0.05
CCDC188H7C350 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC188H7C350 GCOM2-201ENST00000509133 1104 ntBASIC15.38■□□□□ 0.05
CCDC188H7C350 AC097493.3-201ENST00000509725 367 ntBASIC15.38■□□□□ 0.05
CCDC188H7C350 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.38■□□□□ 0.05
CCDC188H7C350 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.38■□□□□ 0.05
CCDC188H7C350 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.38■□□□□ 0.05
CCDC188H7C350 BRI3BPP1-201ENST00000594224 787 ntBASIC15.38■□□□□ 0.05
CCDC188H7C350 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC188H7C350 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 KHSRPP1-201ENST00000427983 1768 ntBASIC15.38■□□□□ 0.05
CCDC188H7C350 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC188H7C350 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CCDC188H7C350 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC188H7C350 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC188H7C350 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC188H7C350 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC188H7C350 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.37■□□□□ 0.05
CCDC188H7C350 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC188H7C350 AGAP10P-201ENST00000454844 2418 ntBASIC15.37■□□□□ 0.05
CCDC188H7C350 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.37■□□□□ 0.05
CCDC188H7C350 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CCDC188H7C350 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.37■□□□□ 0.05
CCDC188H7C350 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CCDC188H7C350 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC188H7C350 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC188H7C350 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CCDC188H7C350 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC188H7C350 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC188H7C350 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC188H7C350 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC188H7C350 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC188H7C350 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC188H7C350 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.37■□□□□ 0.05
CCDC188H7C350 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CCDC188H7C350 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.37■□□□□ 0.05
CCDC188H7C350 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC188H7C350 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC188H7C350 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.37■□□□□ 0.05
CCDC188H7C350 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.37■□□□□ 0.05
CCDC188H7C350 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC188H7C350 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.37■□□□□ 0.05
CCDC188H7C350 SPDYE22P-201ENST00000582158 798 ntBASIC15.37■□□□□ 0.05
CCDC188H7C350 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.37■□□□□ 0.05
CCDC188H7C350 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC188H7C350 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.37■□□□□ 0.05
CCDC188H7C350 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC188H7C350 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC188H7C350 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC188H7C350 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.37■□□□□ 0.05
CCDC188H7C350 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CCDC188H7C350 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC188H7C350 AC139712.1-201ENST00000378256 1875 ntBASIC15.37■□□□□ 0.05
CCDC188H7C350 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CCDC188H7C350 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC188H7C350 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
CCDC188H7C350 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC188H7C350 AL157996.1-201ENST00000624684 2299 ntBASIC15.37■□□□□ 0.05
CCDC188H7C350 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC188H7C350 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC188H7C350 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CCDC188H7C350 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms