Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 AC013726.1-201ENST00000563747 2285 ntBASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 AC092053.3-201ENST00000641308 4975 ntBASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 FGD5P1-202ENST00000614866 2498 ntBASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 NKAIN1P1-201ENST00000435754 582 ntBASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 BX284668.4-201ENST00000453917 508 ntBASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 SERPINA13P-202ENST00000478994 924 ntBASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 HIST2H2BC-201ENST00000498492 580 ntBASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 AC044849.1-201ENST00000519737 1188 ntBASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 AL136301.1-201ENST00000615830 422 ntBASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 AC002472.3-201ENST00000640124 621 ntBASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 LINC02228-204ENST00000642115 2962 ntBASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms