Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.02□□□□□ -0.32
NPIPB4C9JG80 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 FAM58BP-201ENST00000439056 645 ntBASIC13.02□□□□□ -0.33
NPIPB4C9JG80 HOMER2P2-201ENST00000451621 847 ntBASIC13.02□□□□□ -0.33
NPIPB4C9JG80 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 AC012645.4-201ENST00000610691 1061 ntBASIC13.02□□□□□ -0.33
NPIPB4C9JG80 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.02□□□□□ -0.33
NPIPB4C9JG80 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 PDIA3P1-201ENST00000471856 1510 ntBASIC13.02□□□□□ -0.33
NPIPB4C9JG80 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 AC126755.1-201ENST00000525846 6405 ntBASIC13.02□□□□□ -0.33
NPIPB4C9JG80 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPB4C9JG80 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.01□□□□□ -0.33
NPIPB4C9JG80 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 AC090643.2-201ENST00000623442 2029 ntBASIC13.01□□□□□ -0.33
NPIPB4C9JG80 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 COX20P2-201ENST00000452636 358 ntBASIC13.01□□□□□ -0.33
NPIPB4C9JG80 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 DUX4L46-201ENST00000566845 751 ntBASIC13.01□□□□□ -0.33
NPIPB4C9JG80 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms