Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AL353637.1-201ENST00000451571 732 ntBASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 AC079336.7-201ENST00000623428 1078 ntBASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 AC092135.3-201ENST00000624151 1846 ntBASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 AP002414.2-201ENST00000591780 3365 ntBASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 AC078875.1-201ENST00000431907 724 ntBASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 AL645933.1-201ENST00000440087 609 ntBASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 MAGEA5-201ENST00000446757 942 ntBASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 AC006122.1-201ENST00000493323 440 ntBASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 POU5F1P2-201ENST00000521750 823 ntBASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 AC020922.3-201ENST00000595064 547 ntBASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 AC006486.2-201ENST00000624246 2199 ntBASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TBC1D3FA6NER0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms